Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CtifQ6PEE2 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CtifQ6PEE2 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CtifQ6PEE2 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
CtifQ6PEE2 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CtifQ6PEE2 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CtifQ6PEE2 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.98□□□□□ -0.33
CtifQ6PEE2 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.98□□□□□ -0.33
CtifQ6PEE2 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CtifQ6PEE2 Gm45089-201ENSMUST00000208082 2040 ntBASIC12.98□□□□□ -0.33
CtifQ6PEE2 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CtifQ6PEE2 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CtifQ6PEE2 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CtifQ6PEE2 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CtifQ6PEE2 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CtifQ6PEE2 AC207128.2-201ENSMUST00000223708 1924 ntBASIC12.98□□□□□ -0.33
CtifQ6PEE2 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
CtifQ6PEE2 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CtifQ6PEE2 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CtifQ6PEE2 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CtifQ6PEE2 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
CtifQ6PEE2 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
CtifQ6PEE2 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
CtifQ6PEE2 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC12.98□□□□□ -0.33
CtifQ6PEE2 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CtifQ6PEE2 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CtifQ6PEE2 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CtifQ6PEE2 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.98□□□□□ -0.33
CtifQ6PEE2 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CtifQ6PEE2 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.98□□□□□ -0.33
CtifQ6PEE2 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CtifQ6PEE2 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.98□□□□□ -0.33
CtifQ6PEE2 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.98□□□□□ -0.33
CtifQ6PEE2 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.98□□□□□ -0.33
CtifQ6PEE2 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CtifQ6PEE2 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.98□□□□□ -0.33
CtifQ6PEE2 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CtifQ6PEE2 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CtifQ6PEE2 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CtifQ6PEE2 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CtifQ6PEE2 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CtifQ6PEE2 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CtifQ6PEE2 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CtifQ6PEE2 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CtifQ6PEE2 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CtifQ6PEE2 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.98□□□□□ -0.33
CtifQ6PEE2 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CtifQ6PEE2 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CtifQ6PEE2 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CtifQ6PEE2 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.98□□□□□ -0.33
CtifQ6PEE2 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CtifQ6PEE2 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CtifQ6PEE2 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CtifQ6PEE2 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.97□□□□□ -0.33
CtifQ6PEE2 Gm14704-201ENSMUST00000120300 874 ntBASIC12.97□□□□□ -0.33
CtifQ6PEE2 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.97□□□□□ -0.33
CtifQ6PEE2 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Gm9136-201ENSMUST00000193368 454 ntBASIC12.97□□□□□ -0.33
CtifQ6PEE2 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.97□□□□□ -0.33
CtifQ6PEE2 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CtifQ6PEE2 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms