Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.37□□□□□ -0.43
Casc4Q6P2L7 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Casc4Q6P2L7 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Casc4Q6P2L7 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Casc4Q6P2L7 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Casc4Q6P2L7 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Casc4Q6P2L7 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Casc4Q6P2L7 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Casc4Q6P2L7 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Casc4Q6P2L7 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Casc4Q6P2L7 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.37□□□□□ -0.43
Casc4Q6P2L7 Gm15547-201ENSMUST00000122152 333 ntBASIC12.37□□□□□ -0.43
Casc4Q6P2L7 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Casc4Q6P2L7 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Casc4Q6P2L7 Gm24845-201ENSMUST00000158034 109 ntBASIC12.37□□□□□ -0.43
Casc4Q6P2L7 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.37□□□□□ -0.43
Casc4Q6P2L7 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Casc4Q6P2L7 Gm27390-201ENSMUST00000184516 176 ntBASIC12.37□□□□□ -0.43
Casc4Q6P2L7 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.37□□□□□ -0.43
Casc4Q6P2L7 Gm44958-201ENSMUST00000203734 736 ntBASIC12.37□□□□□ -0.43
Casc4Q6P2L7 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.37□□□□□ -0.43
Casc4Q6P2L7 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Casc4Q6P2L7 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Casc4Q6P2L7 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Casc4Q6P2L7 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Casc4Q6P2L7 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Casc4Q6P2L7 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Casc4Q6P2L7 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Casc4Q6P2L7 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Casc4Q6P2L7 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Casc4Q6P2L7 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.37□□□□□ -0.43
Casc4Q6P2L7 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Casc4Q6P2L7 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Casc4Q6P2L7 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Casc4Q6P2L7 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Casc4Q6P2L7 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Casc4Q6P2L7 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Casc4Q6P2L7 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Casc4Q6P2L7 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Casc4Q6P2L7 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Casc4Q6P2L7 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Casc4Q6P2L7 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Casc4Q6P2L7 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.36□□□□□ -0.43
Casc4Q6P2L7 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.36□□□□□ -0.43
Casc4Q6P2L7 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Casc4Q6P2L7 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Casc4Q6P2L7 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Casc4Q6P2L7 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Casc4Q6P2L7 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.36□□□□□ -0.43
Casc4Q6P2L7 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Casc4Q6P2L7 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Casc4Q6P2L7 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Casc4Q6P2L7 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Casc4Q6P2L7 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Casc4Q6P2L7 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.36□□□□□ -0.43
Casc4Q6P2L7 Gm24255-201ENSMUST00000104481 128 ntBASIC12.36□□□□□ -0.43
Casc4Q6P2L7 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Casc4Q6P2L7 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.36□□□□□ -0.43
Casc4Q6P2L7 Gm14832-201ENSMUST00000121289 322 ntBASIC12.36□□□□□ -0.43
Casc4Q6P2L7 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Casc4Q6P2L7 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.36□□□□□ -0.43
Casc4Q6P2L7 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.36□□□□□ -0.43
Casc4Q6P2L7 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.36□□□□□ -0.43
Casc4Q6P2L7 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Casc4Q6P2L7 Gm20482-202ENSMUST00000174729 825 ntBASIC12.36□□□□□ -0.43
Casc4Q6P2L7 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.36□□□□□ -0.43
Casc4Q6P2L7 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.36□□□□□ -0.43
Casc4Q6P2L7 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Casc4Q6P2L7 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Casc4Q6P2L7 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.36□□□□□ -0.43
Casc4Q6P2L7 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Casc4Q6P2L7 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Casc4Q6P2L7 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Casc4Q6P2L7 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Casc4Q6P2L7 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.36□□□□□ -0.43
Casc4Q6P2L7 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Casc4Q6P2L7 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Casc4Q6P2L7 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.36□□□□□ -0.43
Casc4Q6P2L7 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.36□□□□□ -0.43
Casc4Q6P2L7 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Casc4Q6P2L7 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Casc4Q6P2L7 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Casc4Q6P2L7 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Casc4Q6P2L7 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Casc4Q6P2L7 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Casc4Q6P2L7 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Casc4Q6P2L7 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Casc4Q6P2L7 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Casc4Q6P2L7 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Casc4Q6P2L7 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Casc4Q6P2L7 Gm11930-201ENSMUST00000117788 190 ntBASIC12.35□□□□□ -0.43
Casc4Q6P2L7 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.35□□□□□ -0.43
Casc4Q6P2L7 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Casc4Q6P2L7 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Casc4Q6P2L7 Gm27320-201ENSMUST00000184892 109 ntBASIC12.35□□□□□ -0.43
Casc4Q6P2L7 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Casc4Q6P2L7 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Casc4Q6P2L7 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.35□□□□□ -0.43
Casc4Q6P2L7 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.35□□□□□ -0.43
Casc4Q6P2L7 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms