Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ctr9Q62018 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctr9Q62018 AC123619.2-202ENSMUST00000225097 1568 ntBASIC14.4□□□□□ -0.1
Ctr9Q62018 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctr9Q62018 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ctr9Q62018 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
Ctr9Q62018 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ctr9Q62018 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctr9Q62018 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctr9Q62018 Gm23200-201ENSMUST00000104379 132 ntBASIC14.4□□□□□ -0.1
Ctr9Q62018 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC14.4□□□□□ -0.1
Ctr9Q62018 Gm4909-201ENSMUST00000118749 794 ntBASIC14.4□□□□□ -0.1
Ctr9Q62018 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Ctr9Q62018 Gm5616-201ENSMUST00000165252 384 ntBASIC14.4□□□□□ -0.1
Ctr9Q62018 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
Ctr9Q62018 Gm8741-201ENSMUST00000174736 384 ntBASIC14.4□□□□□ -0.1
Ctr9Q62018 Rn7s1-201ENSMUST00000174924 300 ntBASIC14.4□□□□□ -0.1
Ctr9Q62018 Rn7s2-201ENSMUST00000175032 300 ntBASIC14.4□□□□□ -0.1
Ctr9Q62018 Gm26461-201ENSMUST00000175064 290 ntBASIC14.4□□□□□ -0.1
Ctr9Q62018 Gm9445-201ENSMUST00000207454 1285 ntBASIC14.4□□□□□ -0.1
Ctr9Q62018 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ctr9Q62018 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctr9Q62018 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.4□□□□□ -0.1
Ctr9Q62018 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ctr9Q62018 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctr9Q62018 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctr9Q62018 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctr9Q62018 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctr9Q62018 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ctr9Q62018 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Ctr9Q62018 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctr9Q62018 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctr9Q62018 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctr9Q62018 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ctr9Q62018 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ctr9Q62018 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Ctr9Q62018 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctr9Q62018 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC14.4□□□□□ -0.1
Ctr9Q62018 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctr9Q62018 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctr9Q62018 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.11
Ctr9Q62018 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctr9Q62018 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC14.39□□□□□ -0.11
Ctr9Q62018 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctr9Q62018 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ctr9Q62018 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctr9Q62018 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctr9Q62018 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctr9Q62018 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ctr9Q62018 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Ctr9Q62018 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ctr9Q62018 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.39□□□□□ -0.11
Ctr9Q62018 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctr9Q62018 Gm7722-201ENSMUST00000120646 741 ntBASIC14.39□□□□□ -0.11
Ctr9Q62018 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.39□□□□□ -0.11
Ctr9Q62018 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctr9Q62018 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctr9Q62018 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ctr9Q62018 Gm29615-201ENSMUST00000185371 697 ntBASIC14.39□□□□□ -0.11
Ctr9Q62018 Gm28224-201ENSMUST00000186078 697 ntBASIC14.39□□□□□ -0.11
Ctr9Q62018 Gm29001-201ENSMUST00000186177 697 ntBASIC14.39□□□□□ -0.11
Ctr9Q62018 Gm28292-201ENSMUST00000186593 697 ntBASIC14.39□□□□□ -0.11
Ctr9Q62018 Gm28101-201ENSMUST00000187608 697 ntBASIC14.39□□□□□ -0.11
Ctr9Q62018 Gm29076-201ENSMUST00000187689 697 ntBASIC14.39□□□□□ -0.11
Ctr9Q62018 Gm28302-201ENSMUST00000187931 697 ntBASIC14.39□□□□□ -0.11
Ctr9Q62018 Gm28646-201ENSMUST00000188220 697 ntBASIC14.39□□□□□ -0.11
Ctr9Q62018 Gm28205-201ENSMUST00000189177 697 ntBASIC14.39□□□□□ -0.11
Ctr9Q62018 Gm29032-201ENSMUST00000189797 697 ntBASIC14.39□□□□□ -0.11
Ctr9Q62018 Gm28695-201ENSMUST00000190300 697 ntBASIC14.39□□□□□ -0.11
Ctr9Q62018 Gm37448-201ENSMUST00000192795 697 ntBASIC14.39□□□□□ -0.11
Ctr9Q62018 AY036118-201ENSMUST00000200021 923 ntBASIC14.39□□□□□ -0.11
Ctr9Q62018 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.39□□□□□ -0.11
Ctr9Q62018 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctr9Q62018 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctr9Q62018 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC14.39□□□□□ -0.11
Ctr9Q62018 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ctr9Q62018 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ctr9Q62018 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctr9Q62018 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ctr9Q62018 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctr9Q62018 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctr9Q62018 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctr9Q62018 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ctr9Q62018 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC14.39□□□□□ -0.11
Ctr9Q62018 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ctr9Q62018 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ctr9Q62018 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctr9Q62018 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctr9Q62018 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ctr9Q62018 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ctr9Q62018 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ctr9Q62018 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctr9Q62018 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.38□□□□□ -0.11
Ctr9Q62018 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctr9Q62018 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctr9Q62018 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC14.38□□□□□ -0.11
Ctr9Q62018 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ctr9Q62018 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctr9Q62018 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctr9Q62018 Gm12380-201ENSMUST00000119012 544 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms