Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx2Q61412 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx2Q61412 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx2Q61412 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx2Q61412 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx2Q61412 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.91□□□□□ -0.5
Vsx2Q61412 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx2Q61412 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx2Q61412 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx2Q61412 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx2Q61412 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx2Q61412 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx2Q61412 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Vsx2Q61412 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx2Q61412 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.9□□□□□ -0.5
Vsx2Q61412 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx2Q61412 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.9□□□□□ -0.5
Vsx2Q61412 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.9□□□□□ -0.5
Vsx2Q61412 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx2Q61412 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx2Q61412 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx2Q61412 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx2Q61412 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx2Q61412 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx2Q61412 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx2Q61412 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx2Q61412 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Vsx2Q61412 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.9□□□□□ -0.5
Vsx2Q61412 Gm24255-201ENSMUST00000104481 128 ntBASIC11.9□□□□□ -0.5
Vsx2Q61412 Gm25214-201ENSMUST00000104573 129 ntBASIC11.9□□□□□ -0.5
Vsx2Q61412 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Vsx2Q61412 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx2Q61412 Gm25043-201ENSMUST00000158604 212 ntBASIC11.9□□□□□ -0.5
Vsx2Q61412 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx2Q61412 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx2Q61412 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Vsx2Q61412 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.9□□□□□ -0.5
Vsx2Q61412 Gm31256-201ENSMUST00000194705 506 ntBASIC11.9□□□□□ -0.5
Vsx2Q61412 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx2Q61412 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx2Q61412 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx2Q61412 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx2Q61412 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx2Q61412 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx2Q61412 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx2Q61412 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Vsx2Q61412 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx2Q61412 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Vsx2Q61412 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Vsx2Q61412 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Vsx2Q61412 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx2Q61412 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx2Q61412 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx2Q61412 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Vsx2Q61412 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Vsx2Q61412 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx2Q61412 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.9□□□□□ -0.5
Vsx2Q61412 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx2Q61412 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx2Q61412 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Vsx2Q61412 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Vsx2Q61412 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Vsx2Q61412 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Vsx2Q61412 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx2Q61412 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx2Q61412 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Vsx2Q61412 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx2Q61412 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx2Q61412 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx2Q61412 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx2Q61412 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx2Q61412 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Vsx2Q61412 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx2Q61412 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx2Q61412 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Vsx2Q61412 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx2Q61412 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.89□□□□□ -0.51
Vsx2Q61412 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Vsx2Q61412 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx2Q61412 Gm14999-201ENSMUST00000121039 624 ntBASIC11.89□□□□□ -0.51
Vsx2Q61412 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.89□□□□□ -0.51
Vsx2Q61412 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx2Q61412 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx2Q61412 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Vsx2Q61412 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Vsx2Q61412 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.89□□□□□ -0.51
Vsx2Q61412 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx2Q61412 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.89□□□□□ -0.51
Vsx2Q61412 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.89□□□□□ -0.51
Vsx2Q61412 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Vsx2Q61412 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx2Q61412 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Vsx2Q61412 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx2Q61412 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx2Q61412 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx2Q61412 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx2Q61412 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.89□□□□□ -0.51
Vsx2Q61412 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx2Q61412 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx2Q61412 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms