Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Prdm1Q60636 Gm26361-201ENSMUST00000158868 186 ntBASIC14.22□□□□□ -0.13
Prdm1Q60636 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14.22□□□□□ -0.13
Prdm1Q60636 Gm32999-201ENSMUST00000192693 562 ntBASIC14.22□□□□□ -0.13
Prdm1Q60636 Gm18056-201ENSMUST00000207670 568 ntBASIC14.22□□□□□ -0.13
Prdm1Q60636 Gm18061-201ENSMUST00000208350 562 ntBASIC14.22□□□□□ -0.13
Prdm1Q60636 Gm18063-201ENSMUST00000208529 568 ntBASIC14.22□□□□□ -0.13
Prdm1Q60636 Gm18052-201ENSMUST00000208750 559 ntBASIC14.22□□□□□ -0.13
Prdm1Q60636 Gm8913-201ENSMUST00000209491 641 ntBASIC14.22□□□□□ -0.13
Prdm1Q60636 AC093022.1-201ENSMUST00000226949 1072 ntBASIC14.22□□□□□ -0.13
Prdm1Q60636 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prdm1Q60636 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Prdm1Q60636 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prdm1Q60636 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC14.22□□□□□ -0.13
Prdm1Q60636 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prdm1Q60636 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC14.22□□□□□ -0.13
Prdm1Q60636 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Prdm1Q60636 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC14.22□□□□□ -0.13
Prdm1Q60636 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prdm1Q60636 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prdm1Q60636 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
Prdm1Q60636 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prdm1Q60636 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.22□□□□□ -0.13
Prdm1Q60636 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prdm1Q60636 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prdm1Q60636 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Prdm1Q60636 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prdm1Q60636 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Prdm1Q60636 AC154517.2-201ENSMUST00000220829 2458 ntBASIC14.21□□□□□ -0.13
Prdm1Q60636 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Prdm1Q60636 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prdm1Q60636 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prdm1Q60636 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prdm1Q60636 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prdm1Q60636 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Prdm1Q60636 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Prdm1Q60636 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prdm1Q60636 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC14.21□□□□□ -0.13
Prdm1Q60636 Gm23912-201ENSMUST00000104687 87 ntBASIC14.21□□□□□ -0.13
Prdm1Q60636 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Prdm1Q60636 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.21□□□□□ -0.13
Prdm1Q60636 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.21□□□□□ -0.13
Prdm1Q60636 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Prdm1Q60636 Gm45186-201ENSMUST00000206874 478 ntBASIC14.21□□□□□ -0.13
Prdm1Q60636 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prdm1Q60636 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC14.21□□□□□ -0.13
Prdm1Q60636 AC153954.1-201ENSMUST00000216959 255 ntBASIC14.21□□□□□ -0.13
Prdm1Q60636 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC14.21□□□□□ -0.13
Prdm1Q60636 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prdm1Q60636 CT025624.1-201ENSMUST00000224007 2700 ntBASIC14.21□□□□□ -0.13
Prdm1Q60636 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prdm1Q60636 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prdm1Q60636 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prdm1Q60636 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prdm1Q60636 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Prdm1Q60636 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prdm1Q60636 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.21□□□□□ -0.13
Prdm1Q60636 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prdm1Q60636 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Prdm1Q60636 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Prdm1Q60636 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC14.21□□□□□ -0.14
Prdm1Q60636 Gm18782-201ENSMUST00000209023 1399 ntBASIC14.21□□□□□ -0.14
Prdm1Q60636 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Prdm1Q60636 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Prdm1Q60636 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Prdm1Q60636 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prdm1Q60636 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prdm1Q60636 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prdm1Q60636 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.2□□□□□ -0.14
Prdm1Q60636 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prdm1Q60636 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Prdm1Q60636 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prdm1Q60636 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Prdm1Q60636 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Prdm1Q60636 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Prdm1Q60636 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Prdm1Q60636 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC14.2□□□□□ -0.14
Prdm1Q60636 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC14.2□□□□□ -0.14
Prdm1Q60636 Gm14247-201ENSMUST00000120950 237 ntBASIC14.2□□□□□ -0.14
Prdm1Q60636 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC14.2□□□□□ -0.14
Prdm1Q60636 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC14.2□□□□□ -0.14
Prdm1Q60636 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.2□□□□□ -0.14
Prdm1Q60636 Gm18711-201ENSMUST00000199341 750 ntBASIC14.2□□□□□ -0.14
Prdm1Q60636 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prdm1Q60636 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prdm1Q60636 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prdm1Q60636 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prdm1Q60636 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
Prdm1Q60636 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prdm1Q60636 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Prdm1Q60636 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prdm1Q60636 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Prdm1Q60636 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prdm1Q60636 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Prdm1Q60636 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Prdm1Q60636 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prdm1Q60636 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prdm1Q60636 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prdm1Q60636 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Prdm1Q60636 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms