Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 AC154517.2-201ENSMUST00000220829 2458 ntBASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 Gm5940-201ENSMUST00000117582 1068 ntBASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 Gm35960-201ENSMUST00000202712 767 ntBASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 Gm30285-201ENSMUST00000214614 422 ntBASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 AC153961.1-201ENSMUST00000217760 385 ntBASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 Gm7399-201ENSMUST00000032395 858 ntBASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf20Q5DTM8 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf20Q5DTM8 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf20Q5DTM8 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.5□□□□□ -0.09
Rnf20Q5DTM8 Gm18626-201ENSMUST00000221512 1409 ntBASIC14.5□□□□□ -0.09
Rnf20Q5DTM8 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Rnf20Q5DTM8 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.5□□□□□ -0.09
Rnf20Q5DTM8 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf20Q5DTM8 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf20Q5DTM8 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.5□□□□□ -0.09
Rnf20Q5DTM8 Gm19817-201ENSMUST00000199764 2132 ntBASIC14.5□□□□□ -0.09
Rnf20Q5DTM8 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Rnf20Q5DTM8 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf20Q5DTM8 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Rnf20Q5DTM8 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Rnf20Q5DTM8 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Rnf20Q5DTM8 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Rnf20Q5DTM8 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Rnf20Q5DTM8 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Rnf20Q5DTM8 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC14.5□□□□□ -0.09
Rnf20Q5DTM8 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf20Q5DTM8 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf20Q5DTM8 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf20Q5DTM8 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC14.5□□□□□ -0.09
Rnf20Q5DTM8 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC14.5□□□□□ -0.09
Rnf20Q5DTM8 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC14.5□□□□□ -0.09
Rnf20Q5DTM8 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.5□□□□□ -0.09
Rnf20Q5DTM8 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf20Q5DTM8 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf20Q5DTM8 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf20Q5DTM8 Map1b-203ENSMUST00000223725 2669 ntBASIC14.5□□□□□ -0.09
Rnf20Q5DTM8 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf20Q5DTM8 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf20Q5DTM8 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC14.5□□□□□ -0.09
Rnf20Q5DTM8 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf20Q5DTM8 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf20Q5DTM8 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Rnf20Q5DTM8 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf20Q5DTM8 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf20Q5DTM8 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf20Q5DTM8 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms