Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Gm11244-201ENSMUST00000121243 237 ntBASIC12.34□□□□□ -0.43
Bdp1Q571C7 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC12.34□□□□□ -0.43
Bdp1Q571C7 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC12.34□□□□□ -0.43
Bdp1Q571C7 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Bdp1Q571C7 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC12.34□□□□□ -0.43
Bdp1Q571C7 Gm8815-201ENSMUST00000173809 620 ntBASIC12.34□□□□□ -0.43
Bdp1Q571C7 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Bdp1Q571C7 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Bdp1Q571C7 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC12.34□□□□□ -0.43
Bdp1Q571C7 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Bdp1Q571C7 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Bdp1Q571C7 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Bdp1Q571C7 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Bdp1Q571C7 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Bdp1Q571C7 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Bdp1Q571C7 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Bdp1Q571C7 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Bdp1Q571C7 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Bdp1Q571C7 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Bdp1Q571C7 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Bdp1Q571C7 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Bdp1Q571C7 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Bdp1Q571C7 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Bdp1Q571C7 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Bdp1Q571C7 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Bdp1Q571C7 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Bdp1Q571C7 Gm23612-201ENSMUST00000103823 110 ntBASIC12.34□□□□□ -0.43
Bdp1Q571C7 Gm12986-201ENSMUST00000119037 967 ntBASIC12.34□□□□□ -0.43
Bdp1Q571C7 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.34□□□□□ -0.43
Bdp1Q571C7 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Bdp1Q571C7 Gm13827-201ENSMUST00000148801 372 ntBASIC12.34□□□□□ -0.43
Bdp1Q571C7 Gm23576-201ENSMUST00000179918 110 ntBASIC12.34□□□□□ -0.43
Bdp1Q571C7 Mir7221-201ENSMUST00000184009 72 ntBASIC12.34□□□□□ -0.43
Bdp1Q571C7 Gm2448-201ENSMUST00000207080 559 ntBASIC12.34□□□□□ -0.43
Bdp1Q571C7 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Bdp1Q571C7 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Bdp1Q571C7 CT025689.1-201ENSMUST00000225214 283 ntBASIC12.34□□□□□ -0.43
Bdp1Q571C7 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Bdp1Q571C7 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Bdp1Q571C7 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Bdp1Q571C7 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Bdp1Q571C7 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Bdp1Q571C7 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Bdp1Q571C7 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Bdp1Q571C7 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Bdp1Q571C7 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Bdp1Q571C7 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Bdp1Q571C7 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Bdp1Q571C7 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Bdp1Q571C7 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Bdp1Q571C7 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Bdp1Q571C7 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Bdp1Q571C7 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Bdp1Q571C7 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Bdp1Q571C7 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Bdp1Q571C7 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.33□□□□□ -0.44
Bdp1Q571C7 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.33□□□□□ -0.44
Bdp1Q571C7 Gm26957-201ENSMUST00000182645 977 ntBASIC12.33□□□□□ -0.44
Bdp1Q571C7 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Bdp1Q571C7 Gm8384-201ENSMUST00000190905 704 ntBASIC12.33□□□□□ -0.44
Bdp1Q571C7 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC12.33□□□□□ -0.44
Bdp1Q571C7 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Bdp1Q571C7 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Bdp1Q571C7 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Bdp1Q571C7 Gm9791-201ENSMUST00000060997 447 ntBASIC12.33□□□□□ -0.44
Bdp1Q571C7 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Bdp1Q571C7 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Bdp1Q571C7 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Bdp1Q571C7 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Bdp1Q571C7 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Bdp1Q571C7 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.33□□□□□ -0.44
Bdp1Q571C7 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Bdp1Q571C7 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Bdp1Q571C7 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Bdp1Q571C7 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Bdp1Q571C7 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.33□□□□□ -0.44
Bdp1Q571C7 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Bdp1Q571C7 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Bdp1Q571C7 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Bdp1Q571C7 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Bdp1Q571C7 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Bdp1Q571C7 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.33□□□□□ -0.44
Bdp1Q571C7 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Bdp1Q571C7 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Bdp1Q571C7 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Bdp1Q571C7 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC12.33□□□□□ -0.44
Bdp1Q571C7 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Bdp1Q571C7 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Bdp1Q571C7 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Bdp1Q571C7 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Bdp1Q571C7 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Bdp1Q571C7 Gm43671-201ENSMUST00000200422 433 ntBASIC12.33□□□□□ -0.44
Bdp1Q571C7 Gm44958-201ENSMUST00000203734 736 ntBASIC12.33□□□□□ -0.44
Bdp1Q571C7 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC12.33□□□□□ -0.44
Bdp1Q571C7 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Bdp1Q571C7 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Bdp1Q571C7 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Bdp1Q571C7 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Bdp1Q571C7 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Bdp1Q571C7 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms