Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38aQ4FK66 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38aQ4FK66 Gm13035-201ENSMUST00000117496 342 ntBASIC14.24□□□□□ -0.13
Prpf38aQ4FK66 Gm9062-201ENSMUST00000117712 727 ntBASIC14.24□□□□□ -0.13
Prpf38aQ4FK66 Gm12196-201ENSMUST00000120954 262 ntBASIC14.24□□□□□ -0.13
Prpf38aQ4FK66 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC14.24□□□□□ -0.13
Prpf38aQ4FK66 Gm22902-201ENSMUST00000158488 302 ntBASIC14.24□□□□□ -0.13
Prpf38aQ4FK66 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38aQ4FK66 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38aQ4FK66 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC14.24□□□□□ -0.13
Prpf38aQ4FK66 Gm42629-201ENSMUST00000199063 1102 ntBASIC14.24□□□□□ -0.13
Prpf38aQ4FK66 Gm5369-201ENSMUST00000217499 588 ntBASIC14.24□□□□□ -0.13
Prpf38aQ4FK66 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC14.24□□□□□ -0.13
Prpf38aQ4FK66 Gm807-202ENSMUST00000224929 408 ntBASIC14.24□□□□□ -0.13
Prpf38aQ4FK66 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38aQ4FK66 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38aQ4FK66 Gm37131-201ENSMUST00000192502 1561 ntBASIC14.24□□□□□ -0.13
Prpf38aQ4FK66 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38aQ4FK66 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Prpf38aQ4FK66 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38aQ4FK66 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38aQ4FK66 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38aQ4FK66 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38aQ4FK66 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38aQ4FK66 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38aQ4FK66 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38aQ4FK66 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Prpf38aQ4FK66 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38aQ4FK66 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf38aQ4FK66 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf38aQ4FK66 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf38aQ4FK66 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf38aQ4FK66 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf38aQ4FK66 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf38aQ4FK66 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf38aQ4FK66 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf38aQ4FK66 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf38aQ4FK66 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Prpf38aQ4FK66 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf38aQ4FK66 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Prpf38aQ4FK66 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf38aQ4FK66 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Prpf38aQ4FK66 Gm5419-201ENSMUST00000119301 527 ntBASIC14.23□□□□□ -0.13
Prpf38aQ4FK66 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC14.23□□□□□ -0.13
Prpf38aQ4FK66 Gm8956-201ENSMUST00000203939 825 ntBASIC14.23□□□□□ -0.13
Prpf38aQ4FK66 Gm44100-201ENSMUST00000204329 436 ntBASIC14.23□□□□□ -0.13
Prpf38aQ4FK66 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf38aQ4FK66 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf38aQ4FK66 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC14.23□□□□□ -0.13
Prpf38aQ4FK66 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf38aQ4FK66 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf38aQ4FK66 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Prpf38aQ4FK66 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf38aQ4FK66 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf38aQ4FK66 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf38aQ4FK66 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf38aQ4FK66 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Prpf38aQ4FK66 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf38aQ4FK66 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf38aQ4FK66 Gm6580-201ENSMUST00000117504 1357 ntBASIC14.22□□□□□ -0.13
Prpf38aQ4FK66 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf38aQ4FK66 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf38aQ4FK66 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Prpf38aQ4FK66 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Prpf38aQ4FK66 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf38aQ4FK66 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Prpf38aQ4FK66 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf38aQ4FK66 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf38aQ4FK66 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf38aQ4FK66 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf38aQ4FK66 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf38aQ4FK66 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf38aQ4FK66 Gm14058-201ENSMUST00000116082 735 ntBASIC14.22□□□□□ -0.13
Prpf38aQ4FK66 Gm11509-201ENSMUST00000117358 325 ntBASIC14.22□□□□□ -0.13
Prpf38aQ4FK66 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf38aQ4FK66 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf38aQ4FK66 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf38aQ4FK66 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC14.22□□□□□ -0.13
Prpf38aQ4FK66 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf38aQ4FK66 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf38aQ4FK66 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf38aQ4FK66 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf38aQ4FK66 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf38aQ4FK66 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Prpf38aQ4FK66 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf38aQ4FK66 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf38aQ4FK66 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Prpf38aQ4FK66 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf38aQ4FK66 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf38aQ4FK66 Gm9072-201ENSMUST00000218390 1514 ntBASIC14.21□□□□□ -0.13
Prpf38aQ4FK66 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Prpf38aQ4FK66 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Prpf38aQ4FK66 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf38aQ4FK66 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf38aQ4FK66 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf38aQ4FK66 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf38aQ4FK66 Gm12857-201ENSMUST00000117678 592 ntBASIC14.21□□□□□ -0.13
Prpf38aQ4FK66 Gm12501-201ENSMUST00000119163 529 ntBASIC14.21□□□□□ -0.13
Prpf38aQ4FK66 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Prpf38aQ4FK66 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms