Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Fam196aQ3USH1 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.27□□□□□ -0.44
Fam196aQ3USH1 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Fam196aQ3USH1 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.44
Fam196aQ3USH1 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Fam196aQ3USH1 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Fam196aQ3USH1 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.27□□□□□ -0.44
Fam196aQ3USH1 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Fam196aQ3USH1 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Fam196aQ3USH1 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Fam196aQ3USH1 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Fam196aQ3USH1 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Fam196aQ3USH1 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Fam196aQ3USH1 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.27□□□□□ -0.45
Fam196aQ3USH1 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fam196aQ3USH1 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fam196aQ3USH1 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fam196aQ3USH1 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fam196aQ3USH1 Gm24231-201ENSMUST00000104315 133 ntBASIC12.27□□□□□ -0.45
Fam196aQ3USH1 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fam196aQ3USH1 Gm14807-201ENSMUST00000116640 983 ntBASIC12.27□□□□□ -0.45
Fam196aQ3USH1 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC12.27□□□□□ -0.45
Fam196aQ3USH1 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fam196aQ3USH1 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fam196aQ3USH1 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC12.27□□□□□ -0.45
Fam196aQ3USH1 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.27□□□□□ -0.45
Fam196aQ3USH1 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fam196aQ3USH1 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Fam196aQ3USH1 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Fam196aQ3USH1 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fam196aQ3USH1 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Fam196aQ3USH1 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fam196aQ3USH1 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.27□□□□□ -0.45
Fam196aQ3USH1 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Fam196aQ3USH1 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fam196aQ3USH1 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.27□□□□□ -0.45
Fam196aQ3USH1 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fam196aQ3USH1 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fam196aQ3USH1 Gm5434-202ENSMUST00000222384 1451 ntBASIC12.27□□□□□ -0.45
Fam196aQ3USH1 Gm5434-201ENSMUST00000071825 1451 ntBASIC12.27□□□□□ -0.45
Fam196aQ3USH1 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Fam196aQ3USH1 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fam196aQ3USH1 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Gm26134-201ENSMUST00000178484 110 ntBASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Gm43852-201ENSMUST00000202098 917 ntBASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Gm18499-201ENSMUST00000220808 1021 ntBASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 AC154572.1-201ENSMUST00000226098 1204 ntBASIC12.26□□□□□ -0.45
Fam196aQ3USH1 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fam196aQ3USH1 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Paupar-201ENSMUST00000194826 3482 ntBASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms