Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Nlrc4Q3UP24 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nlrc4Q3UP24 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nlrc4Q3UP24 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Nlrc4Q3UP24 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nlrc4Q3UP24 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nlrc4Q3UP24 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Nlrc4Q3UP24 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nlrc4Q3UP24 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nlrc4Q3UP24 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 Gm12164-201ENSMUST00000121695 551 ntBASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 Gm27390-201ENSMUST00000184516 176 ntBASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 Gm8913-201ENSMUST00000209491 641 ntBASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.85□□□□□ -0.35
Nlrc4Q3UP24 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 Gm14130-201ENSMUST00000118417 987 ntBASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 Gm13996-201ENSMUST00000118456 430 ntBASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Nlrc4Q3UP24 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nlrc4Q3UP24 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nlrc4Q3UP24 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Nlrc4Q3UP24 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Nlrc4Q3UP24 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nlrc4Q3UP24 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms