Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Spg11Q3UHA3 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Spg11Q3UHA3 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Spg11Q3UHA3 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Spg11Q3UHA3 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Spg11Q3UHA3 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.18□□□□□ -0.62
Spg11Q3UHA3 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Spg11Q3UHA3 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Spg11Q3UHA3 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Spg11Q3UHA3 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC11.18□□□□□ -0.62
Spg11Q3UHA3 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Spg11Q3UHA3 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Spg11Q3UHA3 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Spg11Q3UHA3 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC11.18□□□□□ -0.62
Spg11Q3UHA3 AC164099.1-201ENSMUST00000227780 333 ntBASIC11.18□□□□□ -0.62
Spg11Q3UHA3 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Spg11Q3UHA3 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Spg11Q3UHA3 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.18□□□□□ -0.62
Spg11Q3UHA3 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Spg11Q3UHA3 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Spg11Q3UHA3 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.17□□□□□ -0.62
Spg11Q3UHA3 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Gm25830-201ENSMUST00000158923 132 ntBASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Gm44958-201ENSMUST00000203734 736 ntBASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Gm8956-201ENSMUST00000203939 825 ntBASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Gm6108-201ENSMUST00000208365 367 ntBASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Spg11Q3UHA3 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Gm14006-201ENSMUST00000122132 981 ntBASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Kif4-ps-202ENSMUST00000185083 652 ntBASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Gm37207-201ENSMUST00000194284 296 ntBASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Spg11Q3UHA3 AC156790.2-201ENSMUST00000227115 568 ntBASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Gm8181-201ENSMUST00000062242 669 ntBASIC11.17□□□□□ -0.62
Spg11Q3UHA3 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.17□□□□□ -0.62
Spg11Q3UHA3 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Mir7221-201ENSMUST00000184009 72 ntBASIC11.16□□□□□ -0.62
Spg11Q3UHA3 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms