Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Q3KNL4 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Q3KNL4 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Q3KNL4 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Q3KNL4 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Q3KNL4 Gm12390-201ENSMUST00000117897 397 ntBASIC11.97□□□□□ -0.49
Q3KNL4 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.97□□□□□ -0.49
Q3KNL4 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.97□□□□□ -0.49
Q3KNL4 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
Q3KNL4 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.97□□□□□ -0.49
Q3KNL4 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Q3KNL4 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.97□□□□□ -0.49
Q3KNL4 Gm18304-201ENSMUST00000189162 546 ntBASIC11.97□□□□□ -0.49
Q3KNL4 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.97□□□□□ -0.49
Q3KNL4 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Q3KNL4 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Q3KNL4 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Q3KNL4 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Q3KNL4 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.97□□□□□ -0.49
Q3KNL4 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Q3KNL4 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Q3KNL4 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Q3KNL4 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Q3KNL4 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Q3KNL4 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Q3KNL4 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Q3KNL4 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Q3KNL4 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Q3KNL4 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Q3KNL4 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.96□□□□□ -0.49
Q3KNL4 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Q3KNL4 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Q3KNL4 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Q3KNL4 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.96□□□□□ -0.49
Q3KNL4 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Q3KNL4 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Q3KNL4 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Q3KNL4 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Q3KNL4 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Q3KNL4 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.96□□□□□ -0.49
Q3KNL4 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Q3KNL4 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Q3KNL4 Gm11591-201ENSMUST00000120063 702 ntBASIC11.96□□□□□ -0.49
Q3KNL4 Gm7809-201ENSMUST00000153199 742 ntBASIC11.96□□□□□ -0.49
Q3KNL4 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.96□□□□□ -0.49
Q3KNL4 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.96□□□□□ -0.49
Q3KNL4 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Q3KNL4 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Q3KNL4 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Q3KNL4 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.96□□□□□ -0.49
Q3KNL4 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.96□□□□□ -0.49
Q3KNL4 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.96□□□□□ -0.49
Q3KNL4 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.96□□□□□ -0.49
Q3KNL4 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.96□□□□□ -0.49
Q3KNL4 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Q3KNL4 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Q3KNL4 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Q3KNL4 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Q3KNL4 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Q3KNL4 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Q3KNL4 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Q3KNL4 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Q3KNL4 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Q3KNL4 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Q3KNL4 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Q3KNL4 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Q3KNL4 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q3KNL4 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q3KNL4 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.95□□□□□ -0.5
Q3KNL4 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.95□□□□□ -0.5
Q3KNL4 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q3KNL4 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q3KNL4 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q3KNL4 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q3KNL4 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q3KNL4 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Q3KNL4 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.95□□□□□ -0.5
Q3KNL4 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q3KNL4 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.95□□□□□ -0.5
Q3KNL4 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q3KNL4 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Q3KNL4 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q3KNL4 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q3KNL4 Gm11424-201ENSMUST00000121929 829 ntBASIC11.95□□□□□ -0.5
Q3KNL4 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.95□□□□□ -0.5
Q3KNL4 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Q3KNL4 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.95□□□□□ -0.5
Q3KNL4 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q3KNL4 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Q3KNL4 Gm8602-201ENSMUST00000184045 607 ntBASIC11.95□□□□□ -0.5
Q3KNL4 Gm44958-201ENSMUST00000203734 736 ntBASIC11.95□□□□□ -0.5
Q3KNL4 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Q3KNL4 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.95□□□□□ -0.5
Q3KNL4 Gm5781-201ENSMUST00000219792 443 ntBASIC11.95□□□□□ -0.5
Q3KNL4 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.95□□□□□ -0.5
Q3KNL4 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q3KNL4 Gm10076-201ENSMUST00000073238 384 ntBASIC11.95□□□□□ -0.5
Q3KNL4 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q3KNL4 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Q3KNL4 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms