Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Gm37969-201ENSMUST00000195777 3409 ntBASIC9.99□□□□□ -0.81
Trim63Q38HM4 Celf1-203ENSMUST00000068747 7614 ntAPPRIS ALT1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Fam210a-201ENSMUST00000042852 9651 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Cracr2a-203ENSMUST00000212051 7625 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Gm16551-203ENSMUST00000160979 3162 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Gm45597-201ENSMUST00000211524 1994 ntBASIC9.98□□□□□ -0.81
Trim63Q38HM4 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC9.98□□□□□ -0.81
Trim63Q38HM4 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC9.98□□□□□ -0.81
Trim63Q38HM4 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Ighv1-25-201ENSMUST00000195638 345 ntBASIC9.98□□□□□ -0.81
Trim63Q38HM4 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Trim63Q38HM4 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim63Q38HM4 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Slit2-208ENSMUST00000173107 9960 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Setd1b-201ENSMUST00000056053 7362 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Gm13410-201ENSMUST00000117058 1415 ntBASIC9.98□□□□□ -0.81
Trim63Q38HM4 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC9.98□□□□□ -0.81
Trim63Q38HM4 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Trim63Q38HM4 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Adam22-204ENSMUST00000088761 9077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Gm6605-201ENSMUST00000031488 2574 ntBASIC9.97□□□□□ -0.81
Trim63Q38HM4 Myo18a-203ENSMUST00000092887 7304 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Tbcel-203ENSMUST00000125995 4849 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Gm12201-201ENSMUST00000120657 1234 ntBASIC9.97□□□□□ -0.81
Trim63Q38HM4 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Trim63Q38HM4 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms