Protein–RNA interactions for Protein: P97785

Gfra1, GDNF family receptor alpha-1, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra1P97785 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Gfra1P97785 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gfra1P97785 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gfra1P97785 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gfra1P97785 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Gfra1P97785 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gfra1P97785 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gfra1P97785 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gfra1P97785 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gfra1P97785 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gfra1P97785 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gfra1P97785 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gfra1P97785 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gfra1P97785 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gfra1P97785 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.11□□□□□ -0.79
Gfra1P97785 Gm14644-201ENSMUST00000116671 647 ntBASIC10.11□□□□□ -0.79
Gfra1P97785 Gm13996-201ENSMUST00000118456 430 ntBASIC10.11□□□□□ -0.79
Gfra1P97785 Gm11439-201ENSMUST00000118598 409 ntBASIC10.11□□□□□ -0.79
Gfra1P97785 Gm13323-201ENSMUST00000120245 1151 ntBASIC10.11□□□□□ -0.79
Gfra1P97785 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC10.11□□□□□ -0.79
Gfra1P97785 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Gfra1P97785 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.11□□□□□ -0.79
Gfra1P97785 Gm42937-201ENSMUST00000197360 752 ntBASIC10.11□□□□□ -0.79
Gfra1P97785 Gm45186-201ENSMUST00000206874 478 ntBASIC10.11□□□□□ -0.79
Gfra1P97785 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Gfra1P97785 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Gfra1P97785 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.11□□□□□ -0.79
Gfra1P97785 AC154252.2-201ENSMUST00000223593 767 ntBASIC10.11□□□□□ -0.79
Gfra1P97785 AC163667.3-201ENSMUST00000225774 222 ntBASIC10.11□□□□□ -0.79
Gfra1P97785 Mettl6-204ENSMUST00000227595 1027 ntBASIC10.11□□□□□ -0.79
Gfra1P97785 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Gfra1P97785 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Gfra1P97785 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Gfra1P97785 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gfra1P97785 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gfra1P97785 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gfra1P97785 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gfra1P97785 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gfra1P97785 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gfra1P97785 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gfra1P97785 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gfra1P97785 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Gfra1P97785 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gfra1P97785 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gfra1P97785 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gfra1P97785 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gfra1P97785 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gfra1P97785 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gfra1P97785 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gfra1P97785 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Gfra1P97785 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Gfra1P97785 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.1□□□□□ -0.79
Gfra1P97785 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.1□□□□□ -0.79
Gfra1P97785 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Gfra1P97785 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Gfra1P97785 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Gfra1P97785 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Gfra1P97785 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Gfra1P97785 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Gfra1P97785 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Gfra1P97785 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Gfra1P97785 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Gfra1P97785 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Gfra1P97785 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Gfra1P97785 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Gfra1P97785 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Gfra1P97785 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
Gfra1P97785 Gm4760-201ENSMUST00000119663 1030 ntBASIC10.1□□□□□ -0.79
Gfra1P97785 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Gfra1P97785 Gm24990-201ENSMUST00000157406 323 ntBASIC10.1□□□□□ -0.79
Gfra1P97785 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Gfra1P97785 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC10.1□□□□□ -0.79
Gfra1P97785 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Gfra1P97785 Gstp-ps-201ENSMUST00000195526 631 ntBASIC10.1□□□□□ -0.79
Gfra1P97785 Gm44124-201ENSMUST00000204159 472 ntBASIC10.1□□□□□ -0.79
Gfra1P97785 Gm44262-201ENSMUST00000204969 372 ntBASIC10.1□□□□□ -0.79
Gfra1P97785 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC10.1□□□□□ -0.79
Gfra1P97785 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC10.1□□□□□ -0.79
Gfra1P97785 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Gfra1P97785 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC10.1□□□□□ -0.79
Gfra1P97785 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.1□□□□□ -0.79
Gfra1P97785 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.1□□□□□ -0.79
Gfra1P97785 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Gfra1P97785 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Gfra1P97785 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Gfra1P97785 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC10.1□□□□□ -0.79
Gfra1P97785 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Gfra1P97785 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.1□□□□□ -0.79
Gfra1P97785 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Gfra1P97785 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Gfra1P97785 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.1□□□□□ -0.79
Gfra1P97785 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Gfra1P97785 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Gfra1P97785 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Gfra1P97785 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Gfra1P97785 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Gfra1P97785 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Gfra1P97785 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Gfra1P97785 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Gfra1P97785 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms