Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Npas1P97459 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Npas1P97459 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Npas1P97459 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Npas1P97459 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Npas1P97459 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Npas1P97459 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Npas1P97459 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Npas1P97459 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Npas1P97459 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Npas1P97459 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Npas1P97459 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
Npas1P97459 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Npas1P97459 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Npas1P97459 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Npas1P97459 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Npas1P97459 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC10.23□□□□□ -0.77
Npas1P97459 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Npas1P97459 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Npas1P97459 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Npas1P97459 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC10.23□□□□□ -0.77
Npas1P97459 Gm15371-201ENSMUST00000117057 784 ntBASIC10.23□□□□□ -0.77
Npas1P97459 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.23□□□□□ -0.77
Npas1P97459 Gm44397-201ENSMUST00000195950 113 ntBASIC10.23□□□□□ -0.77
Npas1P97459 AC124732.1-201ENSMUST00000221551 910 ntBASIC10.23□□□□□ -0.77
Npas1P97459 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Npas1P97459 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Npas1P97459 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Npas1P97459 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Npas1P97459 Gm5867-201ENSMUST00000063197 592 ntBASIC10.23□□□□□ -0.77
Npas1P97459 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Npas1P97459 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Npas1P97459 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Npas1P97459 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Npas1P97459 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Npas1P97459 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Npas1P97459 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Npas1P97459 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Npas1P97459 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC10.23□□□□□ -0.77
Npas1P97459 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Npas1P97459 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.23□□□□□ -0.77
Npas1P97459 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Npas1P97459 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Npas1P97459 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Npas1P97459 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Npas1P97459 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Npas1P97459 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Npas1P97459 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.23□□□□□ -0.77
Npas1P97459 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC10.23□□□□□ -0.77
Npas1P97459 Gm45089-201ENSMUST00000208082 2040 ntBASIC10.23□□□□□ -0.77
Npas1P97459 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Npas1P97459 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.23□□□□□ -0.77
Npas1P97459 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Npas1P97459 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Npas1P97459 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Npas1P97459 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Npas1P97459 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Npas1P97459 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Npas1P97459 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Npas1P97459 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Npas1P97459 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Npas1P97459 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Npas1P97459 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Npas1P97459 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Npas1P97459 Gm12291-201ENSMUST00000121627 311 ntBASIC10.22□□□□□ -0.77
Npas1P97459 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
Npas1P97459 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC10.22□□□□□ -0.77
Npas1P97459 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC10.22□□□□□ -0.77
Npas1P97459 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Npas1P97459 Gm16215-201ENSMUST00000161990 637 ntBASIC10.22□□□□□ -0.77
Npas1P97459 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Npas1P97459 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Npas1P97459 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Npas1P97459 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC10.22□□□□□ -0.77
Npas1P97459 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC10.22□□□□□ -0.77
Npas1P97459 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Npas1P97459 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC10.22□□□□□ -0.77
Npas1P97459 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Npas1P97459 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Npas1P97459 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Npas1P97459 Mir339-201ENSMUST00000083659 96 ntBASIC10.22□□□□□ -0.77
Npas1P97459 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC10.22□□□□□ -0.77
Npas1P97459 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Npas1P97459 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Npas1P97459 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Npas1P97459 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Npas1P97459 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.22□□□□□ -0.77
Npas1P97459 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Npas1P97459 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Npas1P97459 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Npas1P97459 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Npas1P97459 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Npas1P97459 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Npas1P97459 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Npas1P97459 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Npas1P97459 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Npas1P97459 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Npas1P97459 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Npas1P97459 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Npas1P97459 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms