Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CiitaP79621 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CiitaP79621 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CiitaP79621 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CiitaP79621 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CiitaP79621 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CiitaP79621 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CiitaP79621 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CiitaP79621 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CiitaP79621 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.2□□□□□ -0.3
CiitaP79621 Gm23596-201ENSMUST00000104304 132 ntBASIC13.2□□□□□ -0.3
CiitaP79621 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.2□□□□□ -0.3
CiitaP79621 Gm11509-201ENSMUST00000117358 325 ntBASIC13.2□□□□□ -0.3
CiitaP79621 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
CiitaP79621 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CiitaP79621 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CiitaP79621 Mir6979-201ENSMUST00000183927 56 ntBASIC13.2□□□□□ -0.3
CiitaP79621 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CiitaP79621 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CiitaP79621 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CiitaP79621 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CiitaP79621 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CiitaP79621 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CiitaP79621 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CiitaP79621 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CiitaP79621 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CiitaP79621 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
CiitaP79621 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CiitaP79621 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CiitaP79621 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CiitaP79621 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CiitaP79621 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CiitaP79621 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CiitaP79621 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CiitaP79621 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CiitaP79621 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CiitaP79621 Gm13812-201ENSMUST00000118061 1347 ntBASIC13.19□□□□□ -0.3
CiitaP79621 Gm13810-201ENSMUST00000118584 1347 ntBASIC13.19□□□□□ -0.3
CiitaP79621 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CiitaP79621 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CiitaP79621 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CiitaP79621 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CiitaP79621 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CiitaP79621 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CiitaP79621 Gm11450-201ENSMUST00000121144 333 ntBASIC13.19□□□□□ -0.3
CiitaP79621 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.19□□□□□ -0.3
CiitaP79621 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC13.19□□□□□ -0.3
CiitaP79621 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CiitaP79621 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CiitaP79621 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
CiitaP79621 Gm4157-201ENSMUST00000211647 679 ntBASIC13.19□□□□□ -0.3
CiitaP79621 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CiitaP79621 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CiitaP79621 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CiitaP79621 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CiitaP79621 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CiitaP79621 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CiitaP79621 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CiitaP79621 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CiitaP79621 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CiitaP79621 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CiitaP79621 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.18□□□□□ -0.3
CiitaP79621 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CiitaP79621 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CiitaP79621 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CiitaP79621 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
CiitaP79621 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CiitaP79621 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.18□□□□□ -0.3
CiitaP79621 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CiitaP79621 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CiitaP79621 Gm6189-201ENSMUST00000164487 2082 ntBASIC13.18□□□□□ -0.3
CiitaP79621 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC13.18□□□□□ -0.3
CiitaP79621 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.18□□□□□ -0.3
CiitaP79621 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CiitaP79621 Cd63-ps-202ENSMUST00000154992 717 ntBASIC13.18□□□□□ -0.3
CiitaP79621 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
CiitaP79621 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
CiitaP79621 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC13.18□□□□□ -0.3
CiitaP79621 Gm3332-201ENSMUST00000189337 928 ntBASIC13.18□□□□□ -0.3
CiitaP79621 Gm43184-201ENSMUST00000197247 542 ntBASIC13.18□□□□□ -0.3
CiitaP79621 Gm42629-201ENSMUST00000199063 1102 ntBASIC13.18□□□□□ -0.3
CiitaP79621 Gm43138-201ENSMUST00000199123 708 ntBASIC13.18□□□□□ -0.3
CiitaP79621 Gm8956-201ENSMUST00000203939 825 ntBASIC13.18□□□□□ -0.3
CiitaP79621 Gm5369-201ENSMUST00000217499 588 ntBASIC13.18□□□□□ -0.3
CiitaP79621 Gm26448-201ENSMUST00000082446 203 ntBASIC13.18□□□□□ -0.3
CiitaP79621 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CiitaP79621 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CiitaP79621 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CiitaP79621 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CiitaP79621 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CiitaP79621 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.18□□□□□ -0.3
CiitaP79621 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CiitaP79621 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CiitaP79621 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.18□□□□□ -0.3
CiitaP79621 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CiitaP79621 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CiitaP79621 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CiitaP79621 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CiitaP79621 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CiitaP79621 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms