Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sssca1P56873 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sssca1P56873 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Sssca1P56873 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sssca1P56873 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sssca1P56873 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC9.84□□□□□ -0.83
Sssca1P56873 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sssca1P56873 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC9.84□□□□□ -0.83
Sssca1P56873 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sssca1P56873 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Sssca1P56873 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sssca1P56873 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sssca1P56873 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sssca1P56873 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sssca1P56873 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Sssca1P56873 Rgr-203ENSMUST00000225070 4704 ntBASIC9.84□□□□□ -0.83
Sssca1P56873 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sssca1P56873 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sssca1P56873 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Sssca1P56873 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sssca1P56873 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Sssca1P56873 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
Sssca1P56873 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Sssca1P56873 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sssca1P56873 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Sssca1P56873 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC9.84□□□□□ -0.83
Sssca1P56873 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sssca1P56873 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC9.84□□□□□ -0.83
Sssca1P56873 AC110817.1-201ENSMUST00000225706 605 ntBASIC9.84□□□□□ -0.83
Sssca1P56873 AC108416.1-202ENSMUST00000228927 1201 ntBASIC9.84□□□□□ -0.83
Sssca1P56873 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sssca1P56873 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sssca1P56873 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sssca1P56873 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sssca1P56873 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Sssca1P56873 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sssca1P56873 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sssca1P56873 AC164426.2-201ENSMUST00000225993 2492 ntBASIC9.84□□□□□ -0.83
Sssca1P56873 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sssca1P56873 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC9.84□□□□□ -0.83
Sssca1P56873 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Sssca1P56873 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC9.84□□□□□ -0.83
Sssca1P56873 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC9.84□□□□□ -0.83
Sssca1P56873 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sssca1P56873 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sssca1P56873 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Sssca1P56873 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sssca1P56873 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sssca1P56873 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sssca1P56873 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
Sssca1P56873 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sssca1P56873 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sssca1P56873 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.84
Sssca1P56873 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC9.84□□□□□ -0.84
Sssca1P56873 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sssca1P56873 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sssca1P56873 Gm13050-201ENSMUST00000122149 1345 ntBASIC9.83□□□□□ -0.84
Sssca1P56873 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC9.83□□□□□ -0.84
Sssca1P56873 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sssca1P56873 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sssca1P56873 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sssca1P56873 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sssca1P56873 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sssca1P56873 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Sssca1P56873 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sssca1P56873 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sssca1P56873 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sssca1P56873 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sssca1P56873 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sssca1P56873 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Sssca1P56873 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sssca1P56873 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sssca1P56873 Gm11597-201ENSMUST00000121423 964 ntBASIC9.83□□□□□ -0.84
Sssca1P56873 Mir1894-201ENSMUST00000122802 81 ntBASIC9.83□□□□□ -0.84
Sssca1P56873 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Sssca1P56873 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sssca1P56873 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Sssca1P56873 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Sssca1P56873 Gm23984-201ENSMUST00000157139 203 ntBASIC9.83□□□□□ -0.84
Sssca1P56873 Gm22331-201ENSMUST00000158066 136 ntBASIC9.83□□□□□ -0.84
Sssca1P56873 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sssca1P56873 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Sssca1P56873 Gm6244-201ENSMUST00000178732 841 ntBASIC9.83□□□□□ -0.84
Sssca1P56873 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Sssca1P56873 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC9.83□□□□□ -0.84
Sssca1P56873 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
Sssca1P56873 Gm45384-201ENSMUST00000210451 277 ntBASIC9.83□□□□□ -0.84
Sssca1P56873 Gm29705-201ENSMUST00000212598 474 ntBASIC9.83□□□□□ -0.84
Sssca1P56873 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC9.83□□□□□ -0.84
Sssca1P56873 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC9.83□□□□□ -0.84
Sssca1P56873 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sssca1P56873 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Sssca1P56873 Gm10012-201ENSMUST00000078252 192 ntBASIC9.83□□□□□ -0.84
Sssca1P56873 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Sssca1P56873 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sssca1P56873 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Sssca1P56873 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sssca1P56873 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms