Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdkn2bP55271 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Cdkn2bP55271 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdkn2bP55271 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cdkn2bP55271 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdkn2bP55271 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdkn2bP55271 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdkn2bP55271 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cdkn2bP55271 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.65□□□□□ -0.54
Cdkn2bP55271 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
Cdkn2bP55271 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdkn2bP55271 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdkn2bP55271 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdkn2bP55271 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdkn2bP55271 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Cdkn2bP55271 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Cdkn2bP55271 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Cdkn2bP55271 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cdkn2bP55271 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Cdkn2bP55271 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Cdkn2bP55271 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.65□□□□□ -0.54
Cdkn2bP55271 Gm14999-201ENSMUST00000121039 624 ntBASIC11.65□□□□□ -0.54
Cdkn2bP55271 Gm25927-201ENSMUST00000175058 117 ntBASIC11.65□□□□□ -0.54
Cdkn2bP55271 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.65□□□□□ -0.54
Cdkn2bP55271 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cdkn2bP55271 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cdkn2bP55271 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Cdkn2bP55271 Gm43818-201ENSMUST00000200605 466 ntBASIC11.65□□□□□ -0.54
Cdkn2bP55271 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdkn2bP55271 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdkn2bP55271 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdkn2bP55271 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Cdkn2bP55271 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.65□□□□□ -0.54
Cdkn2bP55271 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdkn2bP55271 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cdkn2bP55271 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdkn2bP55271 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdkn2bP55271 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cdkn2bP55271 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Cdkn2bP55271 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cdkn2bP55271 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Cdkn2bP55271 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdkn2bP55271 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdkn2bP55271 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdkn2bP55271 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdkn2bP55271 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdkn2bP55271 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdkn2bP55271 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdkn2bP55271 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdkn2bP55271 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdkn2bP55271 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdkn2bP55271 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdkn2bP55271 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Cdkn2bP55271 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Cdkn2bP55271 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Cdkn2bP55271 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdkn2bP55271 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdkn2bP55271 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.64□□□□□ -0.55
Cdkn2bP55271 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Cdkn2bP55271 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.64□□□□□ -0.55
Cdkn2bP55271 Gm24548-201ENSMUST00000158650 108 ntBASIC11.64□□□□□ -0.55
Cdkn2bP55271 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Cdkn2bP55271 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.64□□□□□ -0.55
Cdkn2bP55271 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdkn2bP55271 Gm42693-201ENSMUST00000196779 631 ntBASIC11.64□□□□□ -0.55
Cdkn2bP55271 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.64□□□□□ -0.55
Cdkn2bP55271 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdkn2bP55271 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.64□□□□□ -0.55
Cdkn2bP55271 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdkn2bP55271 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Cdkn2bP55271 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Cdkn2bP55271 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.64□□□□□ -0.55
Cdkn2bP55271 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdkn2bP55271 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Cdkn2bP55271 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdkn2bP55271 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.64□□□□□ -0.55
Cdkn2bP55271 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.64□□□□□ -0.55
Cdkn2bP55271 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Cdkn2bP55271 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdkn2bP55271 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdkn2bP55271 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdkn2bP55271 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdkn2bP55271 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Cdkn2bP55271 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdkn2bP55271 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cdkn2bP55271 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdkn2bP55271 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.63□□□□□ -0.55
Cdkn2bP55271 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdkn2bP55271 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.63□□□□□ -0.55
Cdkn2bP55271 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdkn2bP55271 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdkn2bP55271 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdkn2bP55271 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdkn2bP55271 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdkn2bP55271 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdkn2bP55271 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdkn2bP55271 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdkn2bP55271 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdkn2bP55271 Gm4984-201ENSMUST00000115987 360 ntBASIC11.63□□□□□ -0.55
Cdkn2bP55271 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms