Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NrlP54846 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.99□□□□□ -0.33
NrlP54846 Gm1821-202ENSMUST00000227415 750 ntBASIC12.99□□□□□ -0.33
NrlP54846 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
NrlP54846 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
NrlP54846 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NrlP54846 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
NrlP54846 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
NrlP54846 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
NrlP54846 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
NrlP54846 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NrlP54846 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NrlP54846 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NrlP54846 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NrlP54846 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NrlP54846 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
NrlP54846 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NrlP54846 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NrlP54846 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NrlP54846 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NrlP54846 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
NrlP54846 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.98□□□□□ -0.33
NrlP54846 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NrlP54846 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NrlP54846 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NrlP54846 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.98□□□□□ -0.33
NrlP54846 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NrlP54846 Gm12196-201ENSMUST00000120954 262 ntBASIC12.98□□□□□ -0.33
NrlP54846 Gm12208-201ENSMUST00000122004 163 ntBASIC12.98□□□□□ -0.33
NrlP54846 Gm23119-201ENSMUST00000158610 140 ntBASIC12.98□□□□□ -0.33
NrlP54846 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NrlP54846 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NrlP54846 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NrlP54846 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
NrlP54846 Gm4482-201ENSMUST00000200876 742 ntBASIC12.98□□□□□ -0.33
NrlP54846 Gm44551-201ENSMUST00000208804 171 ntBASIC12.98□□□□□ -0.33
NrlP54846 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.98□□□□□ -0.33
NrlP54846 Gm10179-201ENSMUST00000086233 688 ntBASIC12.98□□□□□ -0.33
NrlP54846 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NrlP54846 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NrlP54846 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NrlP54846 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NrlP54846 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NrlP54846 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NrlP54846 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NrlP54846 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NrlP54846 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NrlP54846 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NrlP54846 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NrlP54846 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NrlP54846 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.97□□□□□ -0.33
NrlP54846 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.97□□□□□ -0.33
NrlP54846 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NrlP54846 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NrlP54846 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NrlP54846 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NrlP54846 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.97□□□□□ -0.33
NrlP54846 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NrlP54846 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
NrlP54846 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NrlP54846 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NrlP54846 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NrlP54846 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NrlP54846 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
NrlP54846 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NrlP54846 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NrlP54846 Gm23596-201ENSMUST00000104304 132 ntBASIC12.97□□□□□ -0.33
NrlP54846 Gm7851-201ENSMUST00000117574 323 ntBASIC12.97□□□□□ -0.33
NrlP54846 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
NrlP54846 AC135469.1-201ENSMUST00000225984 772 ntBASIC12.97□□□□□ -0.33
NrlP54846 Gm5455-201ENSMUST00000058710 715 ntBASIC12.97□□□□□ -0.33
NrlP54846 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NrlP54846 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
NrlP54846 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NrlP54846 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NrlP54846 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.97□□□□□ -0.33
NrlP54846 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
NrlP54846 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NrlP54846 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NrlP54846 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NrlP54846 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NrlP54846 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
NrlP54846 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
NrlP54846 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
NrlP54846 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NrlP54846 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
NrlP54846 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NrlP54846 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NrlP54846 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NrlP54846 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.96□□□□□ -0.33
NrlP54846 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
NrlP54846 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.96□□□□□ -0.33
NrlP54846 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
NrlP54846 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NrlP54846 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.96□□□□□ -0.33
NrlP54846 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NrlP54846 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NrlP54846 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NrlP54846 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NrlP54846 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms