Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.19□□□□□ -0.14
Cacnb3P54285 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacnb3P54285 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacnb3P54285 Snora73b-201ENSMUST00000083419 205 ntBASIC14.19□□□□□ -0.14
Cacnb3P54285 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cacnb3P54285 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cacnb3P54285 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
Cacnb3P54285 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacnb3P54285 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.19□□□□□ -0.14
Cacnb3P54285 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacnb3P54285 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cacnb3P54285 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacnb3P54285 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacnb3P54285 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cacnb3P54285 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cacnb3P54285 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacnb3P54285 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacnb3P54285 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacnb3P54285 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cacnb3P54285 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacnb3P54285 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cacnb3P54285 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cacnb3P54285 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacnb3P54285 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacnb3P54285 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacnb3P54285 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacnb3P54285 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC14.18□□□□□ -0.14
Cacnb3P54285 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacnb3P54285 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacnb3P54285 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.18□□□□□ -0.14
Cacnb3P54285 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Cacnb3P54285 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Cacnb3P54285 Gm15566-201ENSMUST00000121130 590 ntBASIC14.18□□□□□ -0.14
Cacnb3P54285 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacnb3P54285 AC153505.1-201ENSMUST00000218819 1071 ntBASIC14.18□□□□□ -0.14
Cacnb3P54285 AC129219.2-201ENSMUST00000224324 701 ntBASIC14.18□□□□□ -0.14
Cacnb3P54285 AC132901.1-201ENSMUST00000224345 508 ntBASIC14.18□□□□□ -0.14
Cacnb3P54285 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cacnb3P54285 AC126257.1-201ENSMUST00000213195 1536 ntBASIC14.18□□□□□ -0.14
Cacnb3P54285 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cacnb3P54285 Gm29100-201ENSMUST00000187564 4410 ntBASIC14.18□□□□□ -0.14
Cacnb3P54285 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cacnb3P54285 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacnb3P54285 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC14.18□□□□□ -0.14
Cacnb3P54285 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cacnb3P54285 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacnb3P54285 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cacnb3P54285 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.18□□□□□ -0.14
Cacnb3P54285 AC169511.2-201ENSMUST00000226674 2063 ntBASIC14.18□□□□□ -0.14
Cacnb3P54285 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacnb3P54285 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cacnb3P54285 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacnb3P54285 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacnb3P54285 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacnb3P54285 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacnb3P54285 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacnb3P54285 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cacnb3P54285 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cacnb3P54285 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacnb3P54285 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cacnb3P54285 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacnb3P54285 Gm10731-201ENSMUST00000181171 448 ntBASIC14.17□□□□□ -0.14
Cacnb3P54285 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC14.17□□□□□ -0.14
Cacnb3P54285 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC14.17□□□□□ -0.14
Cacnb3P54285 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC14.17□□□□□ -0.14
Cacnb3P54285 Gm17831-201ENSMUST00000205579 900 ntBASIC14.17□□□□□ -0.14
Cacnb3P54285 Gm44882-201ENSMUST00000205702 802 ntBASIC14.17□□□□□ -0.14
Cacnb3P54285 AC122408.1-201ENSMUST00000218949 218 ntBASIC14.17□□□□□ -0.14
Cacnb3P54285 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacnb3P54285 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacnb3P54285 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cacnb3P54285 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacnb3P54285 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacnb3P54285 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacnb3P54285 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacnb3P54285 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cacnb3P54285 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cacnb3P54285 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cacnb3P54285 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cacnb3P54285 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacnb3P54285 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cacnb3P54285 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacnb3P54285 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacnb3P54285 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cacnb3P54285 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cacnb3P54285 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacnb3P54285 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacnb3P54285 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacnb3P54285 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacnb3P54285 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacnb3P54285 Gm12579-201ENSMUST00000118040 783 ntBASIC14.16□□□□□ -0.14
Cacnb3P54285 Gm15004-201ENSMUST00000119192 630 ntBASIC14.16□□□□□ -0.14
Cacnb3P54285 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC14.16□□□□□ -0.14
Cacnb3P54285 Mir6958-201ENSMUST00000184207 73 ntBASIC14.16□□□□□ -0.14
Cacnb3P54285 Mir8115-201ENSMUST00000184992 119 ntBASIC14.16□□□□□ -0.14
Cacnb3P54285 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.16□□□□□ -0.14
Cacnb3P54285 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC14.16□□□□□ -0.14
Cacnb3P54285 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14.16□□□□□ -0.14
Cacnb3P54285 Gm45550-201ENSMUST00000209380 946 ntBASIC14.16□□□□□ -0.14
Cacnb3P54285 Gm7600-201ENSMUST00000209657 785 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms