Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hnf4aP49698 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Hnf4aP49698 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hnf4aP49698 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Hnf4aP49698 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Hnf4aP49698 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hnf4aP49698 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Hnf4aP49698 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.83□□□□□ -0.52
Hnf4aP49698 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hnf4aP49698 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Hnf4aP49698 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.83□□□□□ -0.52
Hnf4aP49698 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hnf4aP49698 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hnf4aP49698 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hnf4aP49698 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hnf4aP49698 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hnf4aP49698 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hnf4aP49698 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hnf4aP49698 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hnf4aP49698 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hnf4aP49698 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hnf4aP49698 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Hnf4aP49698 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hnf4aP49698 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hnf4aP49698 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.82□□□□□ -0.52
Hnf4aP49698 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hnf4aP49698 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hnf4aP49698 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Hnf4aP49698 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hnf4aP49698 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Hnf4aP49698 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hnf4aP49698 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hnf4aP49698 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hnf4aP49698 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hnf4aP49698 Gm24934-201ENSMUST00000103764 111 ntBASIC11.82□□□□□ -0.52
Hnf4aP49698 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hnf4aP49698 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hnf4aP49698 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hnf4aP49698 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.82□□□□□ -0.52
Hnf4aP49698 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.82□□□□□ -0.52
Hnf4aP49698 Gm10608-202ENSMUST00000213924 676 ntBASIC11.82□□□□□ -0.52
Hnf4aP49698 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Hnf4aP49698 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hnf4aP49698 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hnf4aP49698 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hnf4aP49698 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hnf4aP49698 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hnf4aP49698 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.82□□□□□ -0.52
Hnf4aP49698 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hnf4aP49698 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hnf4aP49698 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hnf4aP49698 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.82□□□□□ -0.52
Hnf4aP49698 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Hnf4aP49698 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hnf4aP49698 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hnf4aP49698 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.82□□□□□ -0.52
Hnf4aP49698 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hnf4aP49698 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hnf4aP49698 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hnf4aP49698 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hnf4aP49698 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hnf4aP49698 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hnf4aP49698 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hnf4aP49698 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hnf4aP49698 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hnf4aP49698 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hnf4aP49698 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.81□□□□□ -0.52
Hnf4aP49698 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hnf4aP49698 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hnf4aP49698 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hnf4aP49698 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hnf4aP49698 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hnf4aP49698 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hnf4aP49698 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hnf4aP49698 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hnf4aP49698 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hnf4aP49698 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hnf4aP49698 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Hnf4aP49698 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Hnf4aP49698 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hnf4aP49698 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hnf4aP49698 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hnf4aP49698 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Hnf4aP49698 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hnf4aP49698 Gm11793-201ENSMUST00000120433 981 ntBASIC11.81□□□□□ -0.52
Hnf4aP49698 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.81□□□□□ -0.52
Hnf4aP49698 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Hnf4aP49698 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.81□□□□□ -0.52
Hnf4aP49698 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hnf4aP49698 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hnf4aP49698 Gm17420-201ENSMUST00000164753 153 ntBASIC11.81□□□□□ -0.52
Hnf4aP49698 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.81□□□□□ -0.52
Hnf4aP49698 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Hnf4aP49698 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.81□□□□□ -0.52
Hnf4aP49698 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.81□□□□□ -0.52
Hnf4aP49698 Gm42693-201ENSMUST00000196779 631 ntBASIC11.81□□□□□ -0.52
Hnf4aP49698 Gm42937-201ENSMUST00000197360 752 ntBASIC11.81□□□□□ -0.52
Hnf4aP49698 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.81□□□□□ -0.52
Hnf4aP49698 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hnf4aP49698 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms