Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh4P39038 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh4P39038 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh4P39038 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cdh4P39038 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.7□□□□□ -0.54
Cdh4P39038 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh4P39038 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh4P39038 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh4P39038 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.7□□□□□ -0.54
Cdh4P39038 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh4P39038 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh4P39038 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh4P39038 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cdh4P39038 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cdh4P39038 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.7□□□□□ -0.54
Cdh4P39038 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh4P39038 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Cdh4P39038 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh4P39038 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Cdh4P39038 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.7□□□□□ -0.54
Cdh4P39038 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh4P39038 Gm44882-201ENSMUST00000205702 802 ntBASIC11.7□□□□□ -0.54
Cdh4P39038 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.7□□□□□ -0.54
Cdh4P39038 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.7□□□□□ -0.54
Cdh4P39038 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.7□□□□□ -0.54
Cdh4P39038 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh4P39038 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Cdh4P39038 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh4P39038 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cdh4P39038 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh4P39038 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh4P39038 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh4P39038 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh4P39038 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh4P39038 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh4P39038 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.7□□□□□ -0.54
Cdh4P39038 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh4P39038 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh4P39038 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.7□□□□□ -0.54
Cdh4P39038 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh4P39038 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh4P39038 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Cdh4P39038 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Cdh4P39038 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.7□□□□□ -0.54
Cdh4P39038 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.7□□□□□ -0.54
Cdh4P39038 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh4P39038 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh4P39038 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh4P39038 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh4P39038 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.69□□□□□ -0.54
Cdh4P39038 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Cdh4P39038 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.69□□□□□ -0.54
Cdh4P39038 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Cdh4P39038 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh4P39038 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh4P39038 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh4P39038 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh4P39038 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.69□□□□□ -0.54
Cdh4P39038 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh4P39038 Matn2-203ENSMUST00000226766 3252 ntBASIC11.69□□□□□ -0.54
Cdh4P39038 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh4P39038 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh4P39038 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh4P39038 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh4P39038 Gm12015-201ENSMUST00000117065 843 ntBASIC11.69□□□□□ -0.54
Cdh4P39038 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh4P39038 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Cdh4P39038 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh4P39038 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Cdh4P39038 Gm38317-201ENSMUST00000195564 343 ntBASIC11.69□□□□□ -0.54
Cdh4P39038 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.69□□□□□ -0.54
Cdh4P39038 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.69□□□□□ -0.54
Cdh4P39038 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.69□□□□□ -0.54
Cdh4P39038 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.69□□□□□ -0.54
Cdh4P39038 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.69□□□□□ -0.54
Cdh4P39038 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh4P39038 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Cdh4P39038 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh4P39038 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Cdh4P39038 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh4P39038 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh4P39038 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.69□□□□□ -0.54
Cdh4P39038 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh4P39038 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh4P39038 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh4P39038 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh4P39038 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh4P39038 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh4P39038 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh4P39038 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh4P39038 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.69□□□□□ -0.54
Cdh4P39038 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Cdh4P39038 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.69□□□□□ -0.54
Cdh4P39038 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh4P39038 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Cdh4P39038 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.68□□□□□ -0.54
Cdh4P39038 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.68□□□□□ -0.54
Cdh4P39038 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdh4P39038 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdh4P39038 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms