Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Gm15198-201ENSMUST00000117283 177 ntBASIC12.49□□□□□ -0.41
Mmp13P33435 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp13P33435 Gm27243-201ENSMUST00000183964 521 ntBASIC12.49□□□□□ -0.41
Mmp13P33435 Gm29396-201ENSMUST00000185659 716 ntBASIC12.49□□□□□ -0.41
Mmp13P33435 Gm38266-201ENSMUST00000194931 421 ntBASIC12.49□□□□□ -0.41
Mmp13P33435 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.49□□□□□ -0.41
Mmp13P33435 Gm43179-201ENSMUST00000198797 275 ntBASIC12.49□□□□□ -0.41
Mmp13P33435 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Mmp13P33435 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Mmp13P33435 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.49□□□□□ -0.41
Mmp13P33435 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp13P33435 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp13P33435 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp13P33435 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp13P33435 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp13P33435 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp13P33435 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp13P33435 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.49□□□□□ -0.41
Mmp13P33435 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Mmp13P33435 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp13P33435 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp13P33435 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.48□□□□□ -0.41
Mmp13P33435 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp13P33435 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp13P33435 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp13P33435 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp13P33435 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Mmp13P33435 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp13P33435 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.48□□□□□ -0.41
Mmp13P33435 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp13P33435 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp13P33435 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp13P33435 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp13P33435 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Mmp13P33435 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Mmp13P33435 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp13P33435 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp13P33435 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.48□□□□□ -0.41
Mmp13P33435 Gm11597-201ENSMUST00000121423 964 ntBASIC12.48□□□□□ -0.41
Mmp13P33435 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.48□□□□□ -0.41
Mmp13P33435 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.48□□□□□ -0.41
Mmp13P33435 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.48□□□□□ -0.41
Mmp13P33435 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.48□□□□□ -0.41
Mmp13P33435 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Mmp13P33435 Gm27501-201ENSMUST00000183599 107 ntBASIC12.48□□□□□ -0.41
Mmp13P33435 Gm37489-201ENSMUST00000191883 159 ntBASIC12.48□□□□□ -0.41
Mmp13P33435 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.48□□□□□ -0.41
Mmp13P33435 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.48□□□□□ -0.41
Mmp13P33435 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Mmp13P33435 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.48□□□□□ -0.41
Mmp13P33435 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.48□□□□□ -0.41
Mmp13P33435 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp13P33435 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp13P33435 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Mmp13P33435 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp13P33435 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Mmp13P33435 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Mmp13P33435 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp13P33435 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Mmp13P33435 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp13P33435 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp13P33435 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp13P33435 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp13P33435 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp13P33435 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp13P33435 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp13P33435 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Mmp13P33435 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp13P33435 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp13P33435 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp13P33435 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp13P33435 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp13P33435 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp13P33435 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp13P33435 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp13P33435 Mir1247-201ENSMUST00000116706 82 ntBASIC12.47□□□□□ -0.41
Mmp13P33435 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp13P33435 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.47□□□□□ -0.41
Mmp13P33435 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.47□□□□□ -0.41
Mmp13P33435 Gm27516-201ENSMUST00000184237 98 ntBASIC12.47□□□□□ -0.41
Mmp13P33435 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp13P33435 Olfr284-202ENSMUST00000206647 966 ntBASIC12.47□□□□□ -0.41
Mmp13P33435 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.47□□□□□ -0.41
Mmp13P33435 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp13P33435 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.47□□□□□ -0.41
Mmp13P33435 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp13P33435 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp13P33435 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp13P33435 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Mmp13P33435 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Mmp13P33435 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp13P33435 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp13P33435 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp13P33435 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp13P33435 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp13P33435 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp13P33435 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.47□□□□□ -0.41
Mmp13P33435 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp13P33435 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Mmp13P33435 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 94.6 ms