Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Mmp3P28862 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Mmp3P28862 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Mmp3P28862 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Mmp3P28862 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Mmp3P28862 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Mmp3P28862 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Mmp3P28862 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC13.02□□□□□ -0.33
Mmp3P28862 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC13.02□□□□□ -0.33
Mmp3P28862 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC13.02□□□□□ -0.33
Mmp3P28862 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC13.02□□□□□ -0.33
Mmp3P28862 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC13.02□□□□□ -0.33
Mmp3P28862 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC13.02□□□□□ -0.33
Mmp3P28862 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Mmp3P28862 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Mmp3P28862 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC13.02□□□□□ -0.33
Mmp3P28862 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Mmp3P28862 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Mmp3P28862 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Mmp3P28862 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Mmp3P28862 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Mmp3P28862 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.33
Mmp3P28862 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.02□□□□□ -0.33
Mmp3P28862 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Mmp3P28862 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Mmp3P28862 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Mmp3P28862 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Mmp3P28862 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC13.01□□□□□ -0.33
Mmp3P28862 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp3P28862 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp3P28862 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Mmp3P28862 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp3P28862 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp3P28862 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.01□□□□□ -0.33
Mmp3P28862 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp3P28862 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp3P28862 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Mmp3P28862 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Mmp3P28862 Gm15004-201ENSMUST00000119192 630 ntBASIC13.01□□□□□ -0.33
Mmp3P28862 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC13.01□□□□□ -0.33
Mmp3P28862 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp3P28862 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp3P28862 Ighv1-48-201ENSMUST00000191795 294 ntBASIC13.01□□□□□ -0.33
Mmp3P28862 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC13.01□□□□□ -0.33
Mmp3P28862 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp3P28862 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Mmp3P28862 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Mmp3P28862 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Mmp3P28862 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp3P28862 Gm43447-201ENSMUST00000198471 1535 ntBASIC13.01□□□□□ -0.33
Mmp3P28862 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp3P28862 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp3P28862 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp3P28862 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Mmp3P28862 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC13.01□□□□□ -0.33
Mmp3P28862 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp3P28862 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp3P28862 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp3P28862 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp3P28862 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp3P28862 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp3P28862 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp3P28862 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13□□□□□ -0.33
Mmp3P28862 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp3P28862 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp3P28862 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13□□□□□ -0.33
Mmp3P28862 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Mmp3P28862 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp3P28862 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp3P28862 Gm9129-201ENSMUST00000218173 1689 ntBASIC13□□□□□ -0.33
Mmp3P28862 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Mmp3P28862 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Mmp3P28862 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp3P28862 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp3P28862 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp3P28862 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13□□□□□ -0.33
Mmp3P28862 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Mmp3P28862 Gm11663-201ENSMUST00000117888 290 ntBASIC13□□□□□ -0.33
Mmp3P28862 Gm13809-201ENSMUST00000117921 597 ntBASIC13□□□□□ -0.33
Mmp3P28862 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp3P28862 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC13□□□□□ -0.33
Mmp3P28862 Gm6397-201ENSMUST00000161973 1069 ntBASIC13□□□□□ -0.33
Mmp3P28862 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Mmp3P28862 Gm5706-201ENSMUST00000181525 993 ntBASIC13□□□□□ -0.33
Mmp3P28862 Mir6546-201ENSMUST00000184460 62 ntBASIC13□□□□□ -0.33
Mmp3P28862 Gm10109-202ENSMUST00000206890 1211 ntBASIC13□□□□□ -0.33
Mmp3P28862 Gm17931-201ENSMUST00000208132 634 ntBASIC13□□□□□ -0.33
Mmp3P28862 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC13□□□□□ -0.33
Mmp3P28862 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Mmp3P28862 Gm45909-201ENSMUST00000212413 1031 ntBASIC13□□□□□ -0.33
Mmp3P28862 AC125486.1-201ENSMUST00000218701 320 ntBASIC13□□□□□ -0.33
Mmp3P28862 Gm18556-201ENSMUST00000219748 1031 ntBASIC13□□□□□ -0.33
Mmp3P28862 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp3P28862 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp3P28862 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Mmp3P28862 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp3P28862 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC13□□□□□ -0.33
Mmp3P28862 Gm7551-201ENSMUST00000089593 1074 ntBASIC13□□□□□ -0.33
Mmp3P28862 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Mmp3P28862 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms