Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pde6aP27664 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC14.12□□□□□ -0.15
Pde6aP27664 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pde6aP27664 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Pde6aP27664 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Pde6aP27664 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.12□□□□□ -0.15
Pde6aP27664 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pde6aP27664 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pde6aP27664 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.12□□□□□ -0.15
Pde6aP27664 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pde6aP27664 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pde6aP27664 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC14.12□□□□□ -0.15
Pde6aP27664 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.12□□□□□ -0.15
Pde6aP27664 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pde6aP27664 AC157950.1-201ENSMUST00000217561 2168 ntBASIC14.12□□□□□ -0.15
Pde6aP27664 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pde6aP27664 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pde6aP27664 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pde6aP27664 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pde6aP27664 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pde6aP27664 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Pde6aP27664 Gm7104-201ENSMUST00000179741 2532 ntBASIC14.11□□□□□ -0.15
Pde6aP27664 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pde6aP27664 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pde6aP27664 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pde6aP27664 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pde6aP27664 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Pde6aP27664 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pde6aP27664 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pde6aP27664 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pde6aP27664 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pde6aP27664 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pde6aP27664 Gm14130-201ENSMUST00000118417 987 ntBASIC14.11□□□□□ -0.15
Pde6aP27664 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC14.11□□□□□ -0.15
Pde6aP27664 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pde6aP27664 Gm37666-201ENSMUST00000194110 866 ntBASIC14.11□□□□□ -0.15
Pde6aP27664 Gm38319-201ENSMUST00000194537 1266 ntBASIC14.11□□□□□ -0.15
Pde6aP27664 Gm43962-201ENSMUST00000203898 190 ntBASIC14.11□□□□□ -0.15
Pde6aP27664 Gm45186-201ENSMUST00000206874 478 ntBASIC14.11□□□□□ -0.15
Pde6aP27664 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC14.11□□□□□ -0.15
Pde6aP27664 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Pde6aP27664 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pde6aP27664 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pde6aP27664 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.11□□□□□ -0.15
Pde6aP27664 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Pde6aP27664 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pde6aP27664 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Pde6aP27664 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Pde6aP27664 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Pde6aP27664 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pde6aP27664 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pde6aP27664 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pde6aP27664 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Pde6aP27664 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pde6aP27664 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pde6aP27664 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Pde6aP27664 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pde6aP27664 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
Pde6aP27664 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Pde6aP27664 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC14.1□□□□□ -0.15
Pde6aP27664 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC14.1□□□□□ -0.15
Pde6aP27664 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pde6aP27664 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pde6aP27664 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pde6aP27664 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pde6aP27664 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pde6aP27664 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pde6aP27664 Gm18893-201ENSMUST00000198416 943 ntBASIC14.1□□□□□ -0.15
Pde6aP27664 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pde6aP27664 Gm17812-201ENSMUST00000204935 318 ntBASIC14.1□□□□□ -0.15
Pde6aP27664 Gm4607-201ENSMUST00000206649 577 ntBASIC14.1□□□□□ -0.15
Pde6aP27664 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC14.1□□□□□ -0.15
Pde6aP27664 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC14.1□□□□□ -0.15
Pde6aP27664 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pde6aP27664 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pde6aP27664 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pde6aP27664 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pde6aP27664 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC14.1□□□□□ -0.15
Pde6aP27664 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Pde6aP27664 CT025624.1-201ENSMUST00000224007 2700 ntBASIC14.1□□□□□ -0.15
Pde6aP27664 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.1□□□□□ -0.15
Pde6aP27664 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6aP27664 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6aP27664 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6aP27664 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC14.09□□□□□ -0.15
Pde6aP27664 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6aP27664 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6aP27664 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6aP27664 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6aP27664 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6aP27664 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6aP27664 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6aP27664 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6aP27664 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Pde6aP27664 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Pde6aP27664 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6aP27664 Gm7003-201ENSMUST00000195089 312 ntBASIC14.09□□□□□ -0.15
Pde6aP27664 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.09□□□□□ -0.15
Pde6aP27664 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6aP27664 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms