Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmga1P17095 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.41□□□□□ -0.42
Hmga1P17095 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmga1P17095 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmga1P17095 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmga1P17095 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmga1P17095 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmga1P17095 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmga1P17095 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Hmga1P17095 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmga1P17095 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmga1P17095 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Hmga1P17095 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmga1P17095 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmga1P17095 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmga1P17095 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Hmga1P17095 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.4□□□□□ -0.42
Hmga1P17095 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmga1P17095 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Hmga1P17095 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hmga1P17095 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmga1P17095 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmga1P17095 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.4□□□□□ -0.42
Hmga1P17095 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmga1P17095 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmga1P17095 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmga1P17095 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmga1P17095 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.4□□□□□ -0.42
Hmga1P17095 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Hmga1P17095 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmga1P17095 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmga1P17095 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmga1P17095 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hmga1P17095 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.4□□□□□ -0.42
Hmga1P17095 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmga1P17095 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmga1P17095 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmga1P17095 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmga1P17095 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmga1P17095 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Hmga1P17095 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmga1P17095 Gm13809-201ENSMUST00000117921 597 ntBASIC12.4□□□□□ -0.42
Hmga1P17095 Gm15432-201ENSMUST00000121106 195 ntBASIC12.4□□□□□ -0.42
Hmga1P17095 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.4□□□□□ -0.42
Hmga1P17095 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.4□□□□□ -0.42
Hmga1P17095 Gm10051-201ENSMUST00000145209 414 ntBASIC12.4□□□□□ -0.42
Hmga1P17095 Gm24514-201ENSMUST00000174961 285 ntBASIC12.4□□□□□ -0.42
Hmga1P17095 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hmga1P17095 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hmga1P17095 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.4□□□□□ -0.42
Hmga1P17095 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.4□□□□□ -0.42
Hmga1P17095 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmga1P17095 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmga1P17095 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmga1P17095 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmga1P17095 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.4□□□□□ -0.42
Hmga1P17095 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmga1P17095 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmga1P17095 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmga1P17095 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hmga1P17095 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Hmga1P17095 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.4□□□□□ -0.43
Hmga1P17095 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Hmga1P17095 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Hmga1P17095 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
Hmga1P17095 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hmga1P17095 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
Hmga1P17095 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.39□□□□□ -0.43
Hmga1P17095 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmga1P17095 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmga1P17095 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmga1P17095 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmga1P17095 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmga1P17095 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Hmga1P17095 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Hmga1P17095 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hmga1P17095 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmga1P17095 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hmga1P17095 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Hmga1P17095 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hmga1P17095 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.39□□□□□ -0.43
Hmga1P17095 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Hmga1P17095 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmga1P17095 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hmga1P17095 Gm9550-201ENSMUST00000161130 862 ntBASIC12.39□□□□□ -0.43
Hmga1P17095 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Hmga1P17095 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
Hmga1P17095 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.39□□□□□ -0.43
Hmga1P17095 Gm37835-201ENSMUST00000193305 361 ntBASIC12.39□□□□□ -0.43
Hmga1P17095 Gm6905-201ENSMUST00000205729 511 ntBASIC12.39□□□□□ -0.43
Hmga1P17095 Gm45575-201ENSMUST00000210283 548 ntBASIC12.39□□□□□ -0.43
Hmga1P17095 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmga1P17095 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.39□□□□□ -0.43
Hmga1P17095 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hmga1P17095 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmga1P17095 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmga1P17095 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmga1P17095 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.39□□□□□ -0.43
Hmga1P17095 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmga1P17095 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 291.3 ms