Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RaraP11416 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RaraP11416 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
RaraP11416 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC13.18□□□□□ -0.3
RaraP11416 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RaraP11416 Gm43984-201ENSMUST00000204572 2864 ntBASIC13.18□□□□□ -0.3
RaraP11416 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RaraP11416 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RaraP11416 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
RaraP11416 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RaraP11416 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
RaraP11416 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
RaraP11416 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RaraP11416 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RaraP11416 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RaraP11416 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
RaraP11416 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RaraP11416 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RaraP11416 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RaraP11416 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.17□□□□□ -0.3
RaraP11416 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RaraP11416 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RaraP11416 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RaraP11416 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC13.17□□□□□ -0.3
RaraP11416 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RaraP11416 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RaraP11416 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RaraP11416 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
RaraP11416 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
RaraP11416 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
RaraP11416 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RaraP11416 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RaraP11416 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
RaraP11416 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
RaraP11416 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
RaraP11416 Gm13226-201ENSMUST00000117838 404 ntBASIC13.17□□□□□ -0.3
RaraP11416 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RaraP11416 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RaraP11416 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RaraP11416 Gm37201-201ENSMUST00000191845 523 ntBASIC13.17□□□□□ -0.3
RaraP11416 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RaraP11416 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RaraP11416 AC093022.4-203ENSMUST00000228523 2657 ntBASIC13.17□□□□□ -0.3
RaraP11416 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RaraP11416 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RaraP11416 Gm38116-201ENSMUST00000193873 1533 ntBASIC13.17□□□□□ -0.3
RaraP11416 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RaraP11416 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RaraP11416 Gm8522-201ENSMUST00000118416 1929 ntBASIC13.17□□□□□ -0.3
RaraP11416 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RaraP11416 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
RaraP11416 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RaraP11416 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RaraP11416 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RaraP11416 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RaraP11416 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RaraP11416 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RaraP11416 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RaraP11416 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
RaraP11416 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RaraP11416 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
RaraP11416 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RaraP11416 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RaraP11416 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
RaraP11416 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC13.16□□□□□ -0.3
RaraP11416 AC108858.2-201ENSMUST00000228186 1425 ntBASIC13.16□□□□□ -0.3
RaraP11416 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RaraP11416 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RaraP11416 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.16□□□□□ -0.3
RaraP11416 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RaraP11416 Gm23931-201ENSMUST00000103842 109 ntBASIC13.16□□□□□ -0.3
RaraP11416 Gm22018-201ENSMUST00000104357 131 ntBASIC13.16□□□□□ -0.3
RaraP11416 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RaraP11416 Gm27023-201ENSMUST00000182372 285 ntBASIC13.16□□□□□ -0.3
RaraP11416 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
RaraP11416 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RaraP11416 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.16□□□□□ -0.3
RaraP11416 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RaraP11416 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.16□□□□□ -0.3
RaraP11416 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.16□□□□□ -0.3
RaraP11416 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RaraP11416 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
RaraP11416 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RaraP11416 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RaraP11416 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RaraP11416 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RaraP11416 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
RaraP11416 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RaraP11416 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RaraP11416 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RaraP11416 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RaraP11416 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC13.15□□□□□ -0.3
RaraP11416 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.15□□□□□ -0.3
RaraP11416 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RaraP11416 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
RaraP11416 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RaraP11416 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RaraP11416 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RaraP11416 Gm24934-201ENSMUST00000103764 111 ntBASIC13.15□□□□□ -0.3
RaraP11416 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms