Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vti1aO89116 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.2□□□□□ -0.3
Vti1aO89116 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Vti1aO89116 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vti1aO89116 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1aO89116 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1aO89116 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1aO89116 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1aO89116 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1aO89116 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1aO89116 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1aO89116 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1aO89116 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1aO89116 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1aO89116 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1aO89116 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC13.19□□□□□ -0.3
Vti1aO89116 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Vti1aO89116 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Vti1aO89116 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1aO89116 Gm12015-201ENSMUST00000117065 843 ntBASIC13.19□□□□□ -0.3
Vti1aO89116 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1aO89116 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.19□□□□□ -0.3
Vti1aO89116 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC13.19□□□□□ -0.3
Vti1aO89116 Gm17040-202ENSMUST00000170597 889 ntBASIC13.19□□□□□ -0.3
Vti1aO89116 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC13.19□□□□□ -0.3
Vti1aO89116 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1aO89116 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1aO89116 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1aO89116 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Vti1aO89116 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1aO89116 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1aO89116 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1aO89116 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.19□□□□□ -0.3
Vti1aO89116 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1aO89116 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.19□□□□□ -0.3
Vti1aO89116 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vti1aO89116 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1aO89116 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.18□□□□□ -0.3
Vti1aO89116 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Vti1aO89116 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Vti1aO89116 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1aO89116 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1aO89116 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.18□□□□□ -0.3
Vti1aO89116 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.18□□□□□ -0.3
Vti1aO89116 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1aO89116 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1aO89116 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1aO89116 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1aO89116 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Vti1aO89116 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1aO89116 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Vti1aO89116 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1aO89116 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1aO89116 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.18□□□□□ -0.3
Vti1aO89116 Rmrp-201ENSMUST00000157463 271 ntBASIC13.18□□□□□ -0.3
Vti1aO89116 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1aO89116 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.18□□□□□ -0.3
Vti1aO89116 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.18□□□□□ -0.3
Vti1aO89116 Gm24514-201ENSMUST00000174961 285 ntBASIC13.18□□□□□ -0.3
Vti1aO89116 Gm5523-201ENSMUST00000180415 997 ntBASIC13.18□□□□□ -0.3
Vti1aO89116 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.18□□□□□ -0.3
Vti1aO89116 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.18□□□□□ -0.3
Vti1aO89116 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.18□□□□□ -0.3
Vti1aO89116 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1aO89116 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1aO89116 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1aO89116 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1aO89116 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1aO89116 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1aO89116 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Vti1aO89116 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1aO89116 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1aO89116 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1aO89116 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vti1aO89116 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1aO89116 Cog3-203ENSMUST00000227473 4197 ntBASIC13.17□□□□□ -0.3
Vti1aO89116 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.17□□□□□ -0.3
Vti1aO89116 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1aO89116 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1aO89116 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1aO89116 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1aO89116 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC13.17□□□□□ -0.3
Vti1aO89116 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Vti1aO89116 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Vti1aO89116 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1aO89116 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Vti1aO89116 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1aO89116 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1aO89116 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1aO89116 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1aO89116 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1aO89116 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Vti1aO89116 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.17□□□□□ -0.3
Vti1aO89116 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1aO89116 Gm15703-201ENSMUST00000120250 880 ntBASIC13.17□□□□□ -0.3
Vti1aO89116 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vti1aO89116 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.17□□□□□ -0.3
Vti1aO89116 Gm13461-201ENSMUST00000120980 662 ntBASIC13.17□□□□□ -0.3
Vti1aO89116 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.17□□□□□ -0.3
Vti1aO89116 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms