Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Copb2O55029 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Copb2O55029 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Copb2O55029 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Copb2O55029 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Copb2O55029 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Copb2O55029 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Copb2O55029 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Copb2O55029 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Copb2O55029 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Copb2O55029 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Copb2O55029 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Copb2O55029 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Copb2O55029 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Copb2O55029 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Copb2O55029 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Copb2O55029 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Copb2O55029 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Copb2O55029 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Copb2O55029 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Copb2O55029 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Copb2O55029 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Copb2O55029 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14□□□□□ -0.17
Copb2O55029 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC14□□□□□ -0.17
Copb2O55029 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Copb2O55029 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Copb2O55029 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Copb2O55029 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Copb2O55029 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Copb2O55029 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14□□□□□ -0.17
Copb2O55029 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Copb2O55029 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Copb2O55029 Gm11450-201ENSMUST00000121144 333 ntBASIC14□□□□□ -0.17
Copb2O55029 Gm12164-201ENSMUST00000121695 551 ntBASIC14□□□□□ -0.17
Copb2O55029 n-R5s14-201ENSMUST00000122688 107 ntBASIC14□□□□□ -0.17
Copb2O55029 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14□□□□□ -0.17
Copb2O55029 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Copb2O55029 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC14□□□□□ -0.17
Copb2O55029 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC14□□□□□ -0.17
Copb2O55029 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC14□□□□□ -0.17
Copb2O55029 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC14□□□□□ -0.17
Copb2O55029 Gm37986-201ENSMUST00000193285 383 ntBASIC14□□□□□ -0.17
Copb2O55029 Gm18038-201ENSMUST00000197900 485 ntBASIC14□□□□□ -0.17
Copb2O55029 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC14□□□□□ -0.17
Copb2O55029 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Copb2O55029 Spcs1-203ENSMUST00000226374 592 ntBASIC14□□□□□ -0.17
Copb2O55029 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Copb2O55029 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Copb2O55029 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Copb2O55029 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Copb2O55029 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14□□□□□ -0.17
Copb2O55029 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC14□□□□□ -0.17
Copb2O55029 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14□□□□□ -0.17
Copb2O55029 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Copb2O55029 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Copb2O55029 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Copb2O55029 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
Copb2O55029 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Copb2O55029 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Copb2O55029 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.99□□□□□ -0.17
Copb2O55029 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Copb2O55029 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Copb2O55029 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Copb2O55029 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Copb2O55029 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.99□□□□□ -0.17
Copb2O55029 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13.99□□□□□ -0.17
Copb2O55029 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC13.99□□□□□ -0.17
Copb2O55029 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13.99□□□□□ -0.17
Copb2O55029 Gm44882-201ENSMUST00000205702 802 ntBASIC13.99□□□□□ -0.17
Copb2O55029 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Copb2O55029 Gm8959-201ENSMUST00000213150 571 ntBASIC13.99□□□□□ -0.17
Copb2O55029 AC133602.1-201ENSMUST00000227510 509 ntBASIC13.99□□□□□ -0.17
Copb2O55029 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Copb2O55029 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Copb2O55029 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Copb2O55029 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Copb2O55029 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Copb2O55029 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Copb2O55029 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Copb2O55029 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Copb2O55029 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Copb2O55029 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Copb2O55029 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC13.99□□□□□ -0.17
Copb2O55029 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Copb2O55029 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Copb2O55029 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Copb2O55029 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Copb2O55029 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Copb2O55029 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.98□□□□□ -0.17
Copb2O55029 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC13.98□□□□□ -0.17
Copb2O55029 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Copb2O55029 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.98□□□□□ -0.17
Copb2O55029 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.98□□□□□ -0.17
Copb2O55029 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Copb2O55029 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Copb2O55029 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Copb2O55029 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Copb2O55029 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Copb2O55029 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Copb2O55029 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms