Protein–RNA interactions for Protein: H3BKF4

Gm20708, Predicted gene 20708, mousemouse

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm20708H3BKF4 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Gm10782-202ENSMUST00000223775 1480 ntBASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Gm12749-201ENSMUST00000122138 1159 ntBASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Gm32999-201ENSMUST00000192693 562 ntBASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.19□□□□□ -0.78
Gm20708H3BKF4 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm20708H3BKF4 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm20708H3BKF4 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm20708H3BKF4 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm20708H3BKF4 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Gm20708H3BKF4 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Gm20708H3BKF4 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Gm20708H3BKF4 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Gm20708H3BKF4 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Gm20708H3BKF4 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.18□□□□□ -0.78
Gm20708H3BKF4 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm20708H3BKF4 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm20708H3BKF4 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.18□□□□□ -0.78
Gm20708H3BKF4 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm20708H3BKF4 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm20708H3BKF4 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Gm20708H3BKF4 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Gm20708H3BKF4 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Gm20708H3BKF4 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm20708H3BKF4 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Gm20708H3BKF4 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC10.18□□□□□ -0.78
Gm20708H3BKF4 Gm25668-201ENSMUST00000157700 129 ntBASIC10.18□□□□□ -0.78
Gm20708H3BKF4 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Gm20708H3BKF4 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.18□□□□□ -0.78
Gm20708H3BKF4 Gm4607-201ENSMUST00000206649 577 ntBASIC10.18□□□□□ -0.78
Gm20708H3BKF4 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm20708H3BKF4 AC123665.1-201ENSMUST00000228204 438 ntBASIC10.18□□□□□ -0.78
Gm20708H3BKF4 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm20708H3BKF4 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm20708H3BKF4 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Gm20708H3BKF4 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Gm20708H3BKF4 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm20708H3BKF4 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm20708H3BKF4 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Gm20708H3BKF4 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Gm20708H3BKF4 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm20708H3BKF4 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm20708H3BKF4 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.18□□□□□ -0.78
Gm20708H3BKF4 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm20708H3BKF4 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms