Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 Gm13570-201ENSMUST00000140763 309 ntBASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 AY702102-202ENSMUST00000194651 1173 ntBASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 Gm42693-201ENSMUST00000196779 631 ntBASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.48□□□□□ -0.41
Pcdh9F8VPK8 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.48□□□□□ -0.41
Pcdh9F8VPK8 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh9F8VPK8 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh9F8VPK8 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh9F8VPK8 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh9F8VPK8 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh9F8VPK8 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh9F8VPK8 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh9F8VPK8 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.48□□□□□ -0.41
Pcdh9F8VPK8 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdh9F8VPK8 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh9F8VPK8 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh9F8VPK8 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh9F8VPK8 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdh9F8VPK8 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh9F8VPK8 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh9F8VPK8 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh9F8VPK8 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh9F8VPK8 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Pcdh9F8VPK8 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh9F8VPK8 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdh9F8VPK8 Gm5187-201ENSMUST00000117317 991 ntBASIC12.48□□□□□ -0.41
Pcdh9F8VPK8 Gm37424-201ENSMUST00000191727 561 ntBASIC12.48□□□□□ -0.41
Pcdh9F8VPK8 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.48□□□□□ -0.41
Pcdh9F8VPK8 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.48□□□□□ -0.41
Pcdh9F8VPK8 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh9F8VPK8 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pcdh9F8VPK8 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh9F8VPK8 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh9F8VPK8 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh9F8VPK8 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh9F8VPK8 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh9F8VPK8 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh9F8VPK8 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh9F8VPK8 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh9F8VPK8 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdh9F8VPK8 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Gm22018-201ENSMUST00000104357 131 ntBASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Gm12957-201ENSMUST00000117835 377 ntBASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Gm13875-201ENSMUST00000120162 282 ntBASIC12.47□□□□□ -0.41
Pcdh9F8VPK8 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms