Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.61□□□□□ -0.07
Ube4aE9Q735 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4aE9Q735 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4aE9Q735 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4aE9Q735 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Ube4aE9Q735 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4aE9Q735 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC14.61□□□□□ -0.07
Ube4aE9Q735 Gm4726-201ENSMUST00000135604 736 ntBASIC14.61□□□□□ -0.07
Ube4aE9Q735 Gm6019-201ENSMUST00000148369 736 ntBASIC14.61□□□□□ -0.07
Ube4aE9Q735 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4aE9Q735 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4aE9Q735 Gm17931-201ENSMUST00000208132 634 ntBASIC14.61□□□□□ -0.07
Ube4aE9Q735 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC14.61□□□□□ -0.07
Ube4aE9Q735 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Ube4aE9Q735 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4aE9Q735 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4aE9Q735 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4aE9Q735 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Ube4aE9Q735 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4aE9Q735 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4aE9Q735 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.61□□□□□ -0.07
Ube4aE9Q735 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ube4aE9Q735 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4aE9Q735 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4aE9Q735 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4aE9Q735 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC14.61□□□□□ -0.07
Ube4aE9Q735 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC14.61□□□□□ -0.07
Ube4aE9Q735 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4aE9Q735 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ube4aE9Q735 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ube4aE9Q735 Gm14150-201ENSMUST00000122404 1354 ntBASIC14.6□□□□□ -0.07
Ube4aE9Q735 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC14.6□□□□□ -0.07
Ube4aE9Q735 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ube4aE9Q735 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ube4aE9Q735 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ube4aE9Q735 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ube4aE9Q735 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Ube4aE9Q735 Gm13916-201ENSMUST00000117368 628 ntBASIC14.6□□□□□ -0.07
Ube4aE9Q735 Gm12579-201ENSMUST00000118040 783 ntBASIC14.6□□□□□ -0.07
Ube4aE9Q735 Gm11956-201ENSMUST00000119525 512 ntBASIC14.6□□□□□ -0.07
Ube4aE9Q735 Gm15566-201ENSMUST00000121130 590 ntBASIC14.6□□□□□ -0.07
Ube4aE9Q735 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC14.6□□□□□ -0.07
Ube4aE9Q735 Gm9034-201ENSMUST00000182071 1005 ntBASIC14.6□□□□□ -0.07
Ube4aE9Q735 Gm9540-201ENSMUST00000188230 478 ntBASIC14.6□□□□□ -0.07
Ube4aE9Q735 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC14.6□□□□□ -0.07
Ube4aE9Q735 Gm9132-201ENSMUST00000210182 832 ntBASIC14.6□□□□□ -0.07
Ube4aE9Q735 Gm18974-201ENSMUST00000221478 1031 ntBASIC14.6□□□□□ -0.07
Ube4aE9Q735 Gm5537-201ENSMUST00000091117 1252 ntBASIC14.6□□□□□ -0.07
Ube4aE9Q735 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ube4aE9Q735 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ube4aE9Q735 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Ube4aE9Q735 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Ube4aE9Q735 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ube4aE9Q735 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Ube4aE9Q735 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Ube4aE9Q735 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ube4aE9Q735 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ube4aE9Q735 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ube4aE9Q735 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ube4aE9Q735 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ube4aE9Q735 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ube4aE9Q735 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ube4aE9Q735 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Ube4aE9Q735 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ube4aE9Q735 Gm14193-201ENSMUST00000105067 153 ntBASIC14.59□□□□□ -0.07
Ube4aE9Q735 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ube4aE9Q735 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ube4aE9Q735 Gm8731-201ENSMUST00000118088 412 ntBASIC14.59□□□□□ -0.07
Ube4aE9Q735 Gm14585-201ENSMUST00000120713 634 ntBASIC14.59□□□□□ -0.07
Ube4aE9Q735 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC14.59□□□□□ -0.07
Ube4aE9Q735 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ube4aE9Q735 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ube4aE9Q735 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC14.59□□□□□ -0.07
Ube4aE9Q735 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC14.59□□□□□ -0.07
Ube4aE9Q735 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ube4aE9Q735 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ube4aE9Q735 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ube4aE9Q735 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ube4aE9Q735 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ube4aE9Q735 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Ube4aE9Q735 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ube4aE9Q735 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.59□□□□□ -0.07
Ube4aE9Q735 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ube4aE9Q735 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ube4aE9Q735 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Ube4aE9Q735 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Ube4aE9Q735 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Ube4aE9Q735 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ube4aE9Q735 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Ube4aE9Q735 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ube4aE9Q735 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ube4aE9Q735 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Ube4aE9Q735 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ube4aE9Q735 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Ube4aE9Q735 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ube4aE9Q735 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Ube4aE9Q735 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ube4aE9Q735 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ube4aE9Q735 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ube4aE9Q735 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms