Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Rprl1-201ENSMUST00000158050 327 ntBASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.05□□□□□ -0.48
Srp54bE9PXC0 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Srp54bE9PXC0 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Srp54bE9PXC0 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srp54bE9PXC0 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srp54bE9PXC0 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.04□□□□□ -0.48
Srp54bE9PXC0 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Srp54bE9PXC0 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Srp54bE9PXC0 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Srp54bE9PXC0 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srp54bE9PXC0 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srp54bE9PXC0 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Srp54bE9PXC0 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srp54bE9PXC0 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Srp54bE9PXC0 Gm15515-201ENSMUST00000117827 822 ntBASIC12.04□□□□□ -0.48
Srp54bE9PXC0 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.04□□□□□ -0.48
Srp54bE9PXC0 Gm5523-201ENSMUST00000180415 997 ntBASIC12.04□□□□□ -0.48
Srp54bE9PXC0 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Srp54bE9PXC0 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.04□□□□□ -0.48
Srp54bE9PXC0 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.04□□□□□ -0.48
Srp54bE9PXC0 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srp54bE9PXC0 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srp54bE9PXC0 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srp54bE9PXC0 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Srp54bE9PXC0 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srp54bE9PXC0 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srp54bE9PXC0 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Srp54bE9PXC0 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srp54bE9PXC0 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srp54bE9PXC0 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Srp54bE9PXC0 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srp54bE9PXC0 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Srp54bE9PXC0 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srp54bE9PXC0 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srp54bE9PXC0 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.04□□□□□ -0.48
Srp54bE9PXC0 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srp54bE9PXC0 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srp54bE9PXC0 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms