Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd6A3KFM7 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Chd6A3KFM7 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Gm14829-201ENSMUST00000121499 1138 ntBASIC9.8□□□□□ -0.84
Chd6A3KFM7 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Gm8234-201ENSMUST00000198523 1107 ntBASIC9.8□□□□□ -0.84
Chd6A3KFM7 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC9.8□□□□□ -0.84
Chd6A3KFM7 AC125409.3-201ENSMUST00000223488 653 ntBASIC9.8□□□□□ -0.84
Chd6A3KFM7 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd6A3KFM7 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd6A3KFM7 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Gm43570-201ENSMUST00000199951 3688 ntBASIC9.8□□□□□ -0.84
Chd6A3KFM7 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Chd6A3KFM7 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd6A3KFM7 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Gm36970-201ENSMUST00000193688 1859 ntBASIC9.8□□□□□ -0.84
Chd6A3KFM7 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Gm42863-201ENSMUST00000197875 2958 ntBASIC9.8□□□□□ -0.84
Chd6A3KFM7 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Araf-202ENSMUST00000120356 1520 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd6A3KFM7 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd6A3KFM7 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd6A3KFM7 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Gm11511-201ENSMUST00000118146 540 ntBASIC9.79□□□□□ -0.84
Chd6A3KFM7 Gm11244-201ENSMUST00000121243 237 ntBASIC9.79□□□□□ -0.84
Chd6A3KFM7 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Chd6A3KFM7 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Mir6934-201ENSMUST00000183965 62 ntBASIC9.79□□□□□ -0.84
Chd6A3KFM7 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Gm5040-201ENSMUST00000218609 800 ntBASIC9.79□□□□□ -0.84
Chd6A3KFM7 Gm26670-202ENSMUST00000226862 340 ntBASIC9.79□□□□□ -0.84
Chd6A3KFM7 Gm26782-203ENSMUST00000227103 751 ntBASIC9.79□□□□□ -0.84
Chd6A3KFM7 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Chd6A3KFM7 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd6A3KFM7 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Chd6A3KFM7 AC122314.1-201ENSMUST00000223056 2239 ntBASIC9.79□□□□□ -0.84
Chd6A3KFM7 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Gm14052-201ENSMUST00000121434 1031 ntBASIC9.79□□□□□ -0.84
Chd6A3KFM7 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Gm4943-201ENSMUST00000132879 424 ntBASIC9.79□□□□□ -0.84
Chd6A3KFM7 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC9.79□□□□□ -0.84
Chd6A3KFM7 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms