Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 AC139382.1-201ENSMUST00000221402 498 ntBASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Itm2b-204ENSMUST00000228637 783 ntBASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Abhd6-203ENSMUST00000225234 1958 ntBASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm13135-201ENSMUST00000117628 3121 ntBASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm22189-201ENSMUST00000103822 86 ntBASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm16202-201ENSMUST00000117532 544 ntBASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm5638-201ENSMUST00000118618 1258 ntBASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm15487-201ENSMUST00000122373 465 ntBASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Mir6956-201ENSMUST00000183598 62 ntBASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm6983-201ENSMUST00000214912 628 ntBASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm10040-201ENSMUST00000080726 1662 ntBASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm42913-201ENSMUST00000197936 1853 ntBASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm6263-201ENSMUST00000120029 1342 ntBASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm43172-201ENSMUST00000202139 2137 ntBASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm43868-201ENSMUST00000205187 2114 ntBASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav3n-3A0A0G2JEM0 AC101945.2-201ENSMUST00000227886 1377 ntBASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm11298-201ENSMUST00000120503 1799 ntBASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC9.24□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms