Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Gm42913-201ENSMUST00000197936 1853 ntBASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Gm6447-201ENSMUST00000118905 835 ntBASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Gm11594-201ENSMUST00000122313 162 ntBASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Gm2213-201ENSMUST00000197485 688 ntBASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Gm18916-201ENSMUST00000198264 1246 ntBASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Gm5161-201ENSMUST00000075243 853 ntBASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Gm24447-201ENSMUST00000083977 338 ntBASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trav8-1A0A075B641 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Trav8-1A0A075B641 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Trav8-1A0A075B641 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
Trav8-1A0A075B641 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Trav8-1A0A075B641 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Trav8-1A0A075B641 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Trav8-1A0A075B641 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Trav8-1A0A075B641 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Trav8-1A0A075B641 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Trav8-1A0A075B641 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC8.71□□□□□ -1.01
Trav8-1A0A075B641 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Trav8-1A0A075B641 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Trav8-1A0A075B641 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Trav8-1A0A075B641 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Trav8-1A0A075B641 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
Trav8-1A0A075B641 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
Trav8-1A0A075B641 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Trav8-1A0A075B641 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Trav8-1A0A075B641 Gm19040-201ENSMUST00000203280 4726 ntBASIC8.71□□□□□ -1.02
Trav8-1A0A075B641 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trav8-1A0A075B641 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trav8-1A0A075B641 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trav8-1A0A075B641 Gm11400-201ENSMUST00000120853 1214 ntBASIC8.71□□□□□ -1.02
Trav8-1A0A075B641 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC8.71□□□□□ -1.02
Trav8-1A0A075B641 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trav8-1A0A075B641 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC8.71□□□□□ -1.02
Trav8-1A0A075B641 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trav8-1A0A075B641 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trav8-1A0A075B641 Gm43703-201ENSMUST00000200523 763 ntBASIC8.71□□□□□ -1.02
Trav8-1A0A075B641 Gm7390-201ENSMUST00000212452 1216 ntBASIC8.71□□□□□ -1.02
Trav8-1A0A075B641 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Trav8-1A0A075B641 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trav8-1A0A075B641 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trav8-1A0A075B641 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Trav8-1A0A075B641 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trav8-1A0A075B641 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Trav8-1A0A075B641 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Trav8-1A0A075B641 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trav8-1A0A075B641 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC8.71□□□□□ -1.02
Trav8-1A0A075B641 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trav8-1A0A075B641 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trav8-1A0A075B641 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trav8-1A0A075B641 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trav8-1A0A075B641 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trav8-1A0A075B641 CT009713.5-203ENSMUST00000224218 2079 ntBASIC8.71□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms