Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.01□□□□□ -0.65
H2afb3S4R1G7 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Gm29127-201ENSMUST00000188304 517 ntBASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.01□□□□□ -0.65
H2afb3S4R1G7 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Gm7653-201ENSMUST00000214567 508 ntBASIC11.01□□□□□ -0.65
H2afb3S4R1G7 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Dopey2-207ENSMUST00000227156 7340 ntBASIC11□□□□□ -0.65
H2afb3S4R1G7 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
H2afb3S4R1G7 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11□□□□□ -0.65
H2afb3S4R1G7 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
H2afb3S4R1G7 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11□□□□□ -0.65
H2afb3S4R1G7 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
H2afb3S4R1G7 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11□□□□□ -0.65
H2afb3S4R1G7 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
H2afb3S4R1G7 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
H2afb3S4R1G7 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
H2afb3S4R1G7 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
H2afb3S4R1G7 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
H2afb3S4R1G7 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11□□□□□ -0.65
H2afb3S4R1G7 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11□□□□□ -0.65
H2afb3S4R1G7 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11□□□□□ -0.65
H2afb3S4R1G7 Gm11597-201ENSMUST00000121423 964 ntBASIC11□□□□□ -0.65
H2afb3S4R1G7 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11□□□□□ -0.65
H2afb3S4R1G7 Gm2639-201ENSMUST00000156881 1297 ntBASIC11□□□□□ -0.65
H2afb3S4R1G7 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11□□□□□ -0.65
H2afb3S4R1G7 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
H2afb3S4R1G7 Gm44405-201ENSMUST00000198952 126 ntBASIC11□□□□□ -0.65
H2afb3S4R1G7 Gm9299-201ENSMUST00000206392 1140 ntBASIC11□□□□□ -0.65
H2afb3S4R1G7 Gm40466-201ENSMUST00000212174 422 ntBASIC11□□□□□ -0.65
H2afb3S4R1G7 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
H2afb3S4R1G7 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
H2afb3S4R1G7 Gm22058-201ENSMUST00000083393 310 ntBASIC11□□□□□ -0.65
H2afb3S4R1G7 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
H2afb3S4R1G7 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
H2afb3S4R1G7 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
H2afb3S4R1G7 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
H2afb3S4R1G7 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11□□□□□ -0.65
H2afb3S4R1G7 Gm8793-201ENSMUST00000183069 1303 ntBASIC11□□□□□ -0.65
H2afb3S4R1G7 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11□□□□□ -0.65
H2afb3S4R1G7 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
H2afb3S4R1G7 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11□□□□□ -0.65
H2afb3S4R1G7 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
H2afb3S4R1G7 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
H2afb3S4R1G7 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11□□□□□ -0.65
H2afb3S4R1G7 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
H2afb3S4R1G7 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11□□□□□ -0.65
H2afb3S4R1G7 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
H2afb3S4R1G7 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11□□□□□ -0.65
H2afb3S4R1G7 Gm37513-201ENSMUST00000194830 2268 ntBASIC11□□□□□ -0.65
H2afb3S4R1G7 Gm38378-201ENSMUST00000195153 2268 ntBASIC11□□□□□ -0.65
H2afb3S4R1G7 Gm5884-201ENSMUST00000036712 1479 ntBASIC11□□□□□ -0.65
H2afb3S4R1G7 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
H2afb3S4R1G7 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
H2afb3S4R1G7 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
H2afb3S4R1G7 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
H2afb3S4R1G7 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.99□□□□□ -0.65
H2afb3S4R1G7 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
H2afb3S4R1G7 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
H2afb3S4R1G7 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
H2afb3S4R1G7 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
H2afb3S4R1G7 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
H2afb3S4R1G7 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
H2afb3S4R1G7 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
H2afb3S4R1G7 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
H2afb3S4R1G7 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
H2afb3S4R1G7 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
H2afb3S4R1G7 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms