Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AmfrQ9R049 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
AmfrQ9R049 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
AmfrQ9R049 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
AmfrQ9R049 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
AmfrQ9R049 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
AmfrQ9R049 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
AmfrQ9R049 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AmfrQ9R049 Gm11531-201ENSMUST00000117614 555 ntBASIC13.67□□□□□ -0.22
AmfrQ9R049 Gm13875-201ENSMUST00000120162 282 ntBASIC13.67□□□□□ -0.22
AmfrQ9R049 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AmfrQ9R049 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AmfrQ9R049 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AmfrQ9R049 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.67□□□□□ -0.22
AmfrQ9R049 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.67□□□□□ -0.22
AmfrQ9R049 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.67□□□□□ -0.22
AmfrQ9R049 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
AmfrQ9R049 Gm45925-201ENSMUST00000218882 744 ntBASIC13.67□□□□□ -0.22
AmfrQ9R049 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.67□□□□□ -0.22
AmfrQ9R049 Gm9257-201ENSMUST00000221254 232 ntBASIC13.67□□□□□ -0.22
AmfrQ9R049 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AmfrQ9R049 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
AmfrQ9R049 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AmfrQ9R049 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AmfrQ9R049 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
AmfrQ9R049 Paupar-201ENSMUST00000194826 3482 ntBASIC13.67□□□□□ -0.22
AmfrQ9R049 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
AmfrQ9R049 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
AmfrQ9R049 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AmfrQ9R049 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AmfrQ9R049 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
AmfrQ9R049 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AmfrQ9R049 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
AmfrQ9R049 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
AmfrQ9R049 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AmfrQ9R049 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AmfrQ9R049 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AmfrQ9R049 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
AmfrQ9R049 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AmfrQ9R049 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AmfrQ9R049 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
AmfrQ9R049 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
AmfrQ9R049 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AmfrQ9R049 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AmfrQ9R049 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
AmfrQ9R049 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
AmfrQ9R049 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
AmfrQ9R049 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
AmfrQ9R049 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
AmfrQ9R049 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AmfrQ9R049 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
AmfrQ9R049 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AmfrQ9R049 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.66□□□□□ -0.22
AmfrQ9R049 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.66□□□□□ -0.22
AmfrQ9R049 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
AmfrQ9R049 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
AmfrQ9R049 Gm2546-201ENSMUST00000182630 991 ntBASIC13.66□□□□□ -0.22
AmfrQ9R049 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.66□□□□□ -0.22
AmfrQ9R049 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.66□□□□□ -0.22
AmfrQ9R049 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.66□□□□□ -0.22
AmfrQ9R049 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.66□□□□□ -0.22
AmfrQ9R049 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.66□□□□□ -0.22
AmfrQ9R049 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AmfrQ9R049 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.66□□□□□ -0.22
AmfrQ9R049 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
AmfrQ9R049 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.66□□□□□ -0.22
AmfrQ9R049 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AmfrQ9R049 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
AmfrQ9R049 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
AmfrQ9R049 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
AmfrQ9R049 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
AmfrQ9R049 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AmfrQ9R049 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AmfrQ9R049 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
AmfrQ9R049 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
AmfrQ9R049 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
AmfrQ9R049 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AmfrQ9R049 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
AmfrQ9R049 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AmfrQ9R049 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.65□□□□□ -0.22
AmfrQ9R049 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AmfrQ9R049 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
AmfrQ9R049 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.65□□□□□ -0.22
AmfrQ9R049 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AmfrQ9R049 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AmfrQ9R049 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AmfrQ9R049 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
AmfrQ9R049 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
AmfrQ9R049 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AmfrQ9R049 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
AmfrQ9R049 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AmfrQ9R049 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
AmfrQ9R049 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
AmfrQ9R049 Gm25214-201ENSMUST00000104573 129 ntBASIC13.65□□□□□ -0.22
AmfrQ9R049 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.65□□□□□ -0.22
AmfrQ9R049 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AmfrQ9R049 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.65□□□□□ -0.22
AmfrQ9R049 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AmfrQ9R049 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AmfrQ9R049 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms