Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm3671-201ENSMUST00000182463 1007 ntBASIC12.88□□□□□ -0.35
Clp1Q99LI9 Gm4654-201ENSMUST00000183305 982 ntBASIC12.88□□□□□ -0.35
Clp1Q99LI9 Gm44329-201ENSMUST00000197469 112 ntBASIC12.88□□□□□ -0.35
Clp1Q99LI9 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.88□□□□□ -0.35
Clp1Q99LI9 Gm18041-201ENSMUST00000218210 618 ntBASIC12.88□□□□□ -0.35
Clp1Q99LI9 Gm6867-201ENSMUST00000219165 425 ntBASIC12.88□□□□□ -0.35
Clp1Q99LI9 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC12.88□□□□□ -0.35
Clp1Q99LI9 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clp1Q99LI9 Gm25517-201ENSMUST00000083865 134 ntBASIC12.88□□□□□ -0.35
Clp1Q99LI9 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Clp1Q99LI9 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.88□□□□□ -0.35
Clp1Q99LI9 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.88□□□□□ -0.35
Clp1Q99LI9 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clp1Q99LI9 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clp1Q99LI9 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clp1Q99LI9 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Clp1Q99LI9 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clp1Q99LI9 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clp1Q99LI9 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.88□□□□□ -0.35
Clp1Q99LI9 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clp1Q99LI9 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clp1Q99LI9 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clp1Q99LI9 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clp1Q99LI9 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clp1Q99LI9 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Clp1Q99LI9 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.88□□□□□ -0.35
Clp1Q99LI9 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clp1Q99LI9 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clp1Q99LI9 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clp1Q99LI9 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clp1Q99LI9 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clp1Q99LI9 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clp1Q99LI9 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clp1Q99LI9 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clp1Q99LI9 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.87□□□□□ -0.35
Clp1Q99LI9 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clp1Q99LI9 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clp1Q99LI9 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clp1Q99LI9 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clp1Q99LI9 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clp1Q99LI9 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.87□□□□□ -0.35
Clp1Q99LI9 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clp1Q99LI9 Gm13182-201ENSMUST00000122241 312 ntBASIC12.87□□□□□ -0.35
Clp1Q99LI9 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clp1Q99LI9 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.87□□□□□ -0.35
Clp1Q99LI9 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clp1Q99LI9 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Clp1Q99LI9 Gm19166-201ENSMUST00000196041 1063 ntBASIC12.87□□□□□ -0.35
Clp1Q99LI9 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC12.87□□□□□ -0.35
Clp1Q99LI9 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.87□□□□□ -0.35
Clp1Q99LI9 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.87□□□□□ -0.35
Clp1Q99LI9 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clp1Q99LI9 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clp1Q99LI9 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Clp1Q99LI9 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.87□□□□□ -0.35
Clp1Q99LI9 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clp1Q99LI9 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clp1Q99LI9 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clp1Q99LI9 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Clp1Q99LI9 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clp1Q99LI9 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clp1Q99LI9 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clp1Q99LI9 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clp1Q99LI9 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Clp1Q99LI9 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clp1Q99LI9 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clp1Q99LI9 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clp1Q99LI9 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clp1Q99LI9 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Clp1Q99LI9 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clp1Q99LI9 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.86□□□□□ -0.35
Clp1Q99LI9 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clp1Q99LI9 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clp1Q99LI9 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Clp1Q99LI9 Gm25880-201ENSMUST00000104331 132 ntBASIC12.86□□□□□ -0.35
Clp1Q99LI9 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.86□□□□□ -0.35
Clp1Q99LI9 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.86□□□□□ -0.35
Clp1Q99LI9 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.86□□□□□ -0.35
Clp1Q99LI9 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clp1Q99LI9 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.86□□□□□ -0.35
Clp1Q99LI9 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.86□□□□□ -0.35
Clp1Q99LI9 Gm4310-201ENSMUST00000177847 889 ntBASIC12.86□□□□□ -0.35
Clp1Q99LI9 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Clp1Q99LI9 Gm28388-201ENSMUST00000186262 437 ntBASIC12.86□□□□□ -0.35
Clp1Q99LI9 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
Clp1Q99LI9 Gm3793-201ENSMUST00000204973 672 ntBASIC12.86□□□□□ -0.35
Clp1Q99LI9 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Clp1Q99LI9 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.86□□□□□ -0.35
Clp1Q99LI9 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.86□□□□□ -0.35
Clp1Q99LI9 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clp1Q99LI9 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clp1Q99LI9 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.86□□□□□ -0.35
Clp1Q99LI9 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.86□□□□□ -0.35
Clp1Q99LI9 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clp1Q99LI9 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.86□□□□□ -0.35
Clp1Q99LI9 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Clp1Q99LI9 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clp1Q99LI9 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clp1Q99LI9 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clp1Q99LI9 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms