Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd3Q99LE3 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd3Q99LE3 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd3Q99LE3 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Lysmd3Q99LE3 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.7□□□□□ -0.38
Lysmd3Q99LE3 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.7□□□□□ -0.38
Lysmd3Q99LE3 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lysmd3Q99LE3 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 Gm16570-201ENSMUST00000161951 436 ntBASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 Gm7003-201ENSMUST00000195089 312 ntBASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 Rps4l-202ENSMUST00000204242 789 ntBASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 Gm44882-201ENSMUST00000205702 802 ntBASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lysmd3Q99LE3 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.68□□□□□ -0.38
Lysmd3Q99LE3 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Lysmd3Q99LE3 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd3Q99LE3 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd3Q99LE3 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd3Q99LE3 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd3Q99LE3 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd3Q99LE3 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd3Q99LE3 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd3Q99LE3 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd3Q99LE3 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Lysmd3Q99LE3 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.68□□□□□ -0.38
Lysmd3Q99LE3 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
Lysmd3Q99LE3 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Lysmd3Q99LE3 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd3Q99LE3 Gm37666-201ENSMUST00000194110 866 ntBASIC12.68□□□□□ -0.38
Lysmd3Q99LE3 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Lysmd3Q99LE3 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd3Q99LE3 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd3Q99LE3 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Lysmd3Q99LE3 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd3Q99LE3 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd3Q99LE3 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd3Q99LE3 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd3Q99LE3 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd3Q99LE3 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
Lysmd3Q99LE3 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.68□□□□□ -0.38
Lysmd3Q99LE3 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd3Q99LE3 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd3Q99LE3 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd3Q99LE3 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.68□□□□□ -0.38
Lysmd3Q99LE3 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd3Q99LE3 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd3Q99LE3 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Lysmd3Q99LE3 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd3Q99LE3 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd3Q99LE3 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd3Q99LE3 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Lysmd3Q99LE3 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd3Q99LE3 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd3Q99LE3 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd3Q99LE3 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd3Q99LE3 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd3Q99LE3 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd3Q99LE3 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.67□□□□□ -0.38
Lysmd3Q99LE3 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
Lysmd3Q99LE3 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Lysmd3Q99LE3 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd3Q99LE3 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd3Q99LE3 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd3Q99LE3 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.67□□□□□ -0.38
Lysmd3Q99LE3 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms