Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb11Q91UZ8 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb11Q91UZ8 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb11Q91UZ8 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb11Q91UZ8 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb11Q91UZ8 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb11Q91UZ8 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb11Q91UZ8 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb11Q91UZ8 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.52□□□□□ -0.4
Pcdhb11Q91UZ8 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb11Q91UZ8 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Pcdhb11Q91UZ8 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.52□□□□□ -0.4
Pcdhb11Q91UZ8 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb11Q91UZ8 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Pcdhb11Q91UZ8 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb11Q91UZ8 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb11Q91UZ8 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.52□□□□□ -0.4
Pcdhb11Q91UZ8 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb11Q91UZ8 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.52□□□□□ -0.41
Pcdhb11Q91UZ8 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Pcdhb11Q91UZ8 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb11Q91UZ8 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb11Q91UZ8 Gm12015-201ENSMUST00000117065 843 ntBASIC12.52□□□□□ -0.41
Pcdhb11Q91UZ8 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb11Q91UZ8 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb11Q91UZ8 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.52□□□□□ -0.41
Pcdhb11Q91UZ8 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb11Q91UZ8 Gm20482-202ENSMUST00000174729 825 ntBASIC12.52□□□□□ -0.41
Pcdhb11Q91UZ8 Gm27390-201ENSMUST00000184516 176 ntBASIC12.52□□□□□ -0.41
Pcdhb11Q91UZ8 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.52□□□□□ -0.41
Pcdhb11Q91UZ8 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.52□□□□□ -0.41
Pcdhb11Q91UZ8 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb11Q91UZ8 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb11Q91UZ8 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb11Q91UZ8 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Pcdhb11Q91UZ8 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb11Q91UZ8 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.52□□□□□ -0.41
Pcdhb11Q91UZ8 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Pcdhb11Q91UZ8 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb11Q91UZ8 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb11Q91UZ8 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb11Q91UZ8 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb11Q91UZ8 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Pcdhb11Q91UZ8 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.52□□□□□ -0.41
Pcdhb11Q91UZ8 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.52□□□□□ -0.41
Pcdhb11Q91UZ8 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb11Q91UZ8 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Pcdhb11Q91UZ8 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb11Q91UZ8 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb11Q91UZ8 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb11Q91UZ8 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.52□□□□□ -0.41
Pcdhb11Q91UZ8 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb11Q91UZ8 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Gm14644-201ENSMUST00000116671 647 ntBASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Gm27046-201ENSMUST00000182160 463 ntBASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb11Q91UZ8 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms