Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 AC165351.1-201ENSMUST00000219078 2020 ntBASIC14.14□□□□□ -0.15
StrcQ8VIM6 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.14□□□□□ -0.15
StrcQ8VIM6 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
StrcQ8VIM6 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
StrcQ8VIM6 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
StrcQ8VIM6 Gm23255-201ENSMUST00000102244 110 ntBASIC14.14□□□□□ -0.15
StrcQ8VIM6 Gm8111-201ENSMUST00000117659 987 ntBASIC14.14□□□□□ -0.15
StrcQ8VIM6 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
StrcQ8VIM6 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
StrcQ8VIM6 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC14.14□□□□□ -0.15
StrcQ8VIM6 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC14.14□□□□□ -0.15
StrcQ8VIM6 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
StrcQ8VIM6 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
StrcQ8VIM6 Rps3a2-201ENSMUST00000074245 792 ntBASIC14.14□□□□□ -0.15
StrcQ8VIM6 Rps3a3-201ENSMUST00000074680 795 ntBASIC14.14□□□□□ -0.15
StrcQ8VIM6 Gm44106-201ENSMUST00000203153 1599 ntBASIC14.14□□□□□ -0.15
StrcQ8VIM6 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
StrcQ8VIM6 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
StrcQ8VIM6 AC174797.1-201ENSMUST00000224339 1649 ntBASIC14.14□□□□□ -0.15
StrcQ8VIM6 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.14□□□□□ -0.15
StrcQ8VIM6 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.14□□□□□ -0.15
StrcQ8VIM6 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
StrcQ8VIM6 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
StrcQ8VIM6 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
StrcQ8VIM6 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
StrcQ8VIM6 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
StrcQ8VIM6 Gm12129-201ENSMUST00000120104 1147 ntBASIC14.13□□□□□ -0.15
StrcQ8VIM6 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC14.13□□□□□ -0.15
StrcQ8VIM6 Gm13284-201ENSMUST00000121020 547 ntBASIC14.13□□□□□ -0.15
StrcQ8VIM6 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC14.13□□□□□ -0.15
StrcQ8VIM6 Gm26047-201ENSMUST00000157308 113 ntBASIC14.13□□□□□ -0.15
StrcQ8VIM6 Gm25226-201ENSMUST00000158198 123 ntBASIC14.13□□□□□ -0.15
StrcQ8VIM6 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
StrcQ8VIM6 Gm4982-201ENSMUST00000160440 1098 ntBASIC14.13□□□□□ -0.15
StrcQ8VIM6 Gm26047-202ENSMUST00000198840 115 ntBASIC14.13□□□□□ -0.15
StrcQ8VIM6 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
StrcQ8VIM6 Gm9204-201ENSMUST00000212641 947 ntBASIC14.13□□□□□ -0.15
StrcQ8VIM6 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC14.13□□□□□ -0.15
StrcQ8VIM6 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
StrcQ8VIM6 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
StrcQ8VIM6 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
StrcQ8VIM6 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
StrcQ8VIM6 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
StrcQ8VIM6 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.13□□□□□ -0.15
StrcQ8VIM6 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC14.13□□□□□ -0.15
StrcQ8VIM6 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
StrcQ8VIM6 Gm6641-201ENSMUST00000196100 1315 ntBASIC14.13□□□□□ -0.15
StrcQ8VIM6 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
StrcQ8VIM6 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
StrcQ8VIM6 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
StrcQ8VIM6 Grk6-205ENSMUST00000224653 2976 ntBASIC14.13□□□□□ -0.15
StrcQ8VIM6 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
StrcQ8VIM6 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
StrcQ8VIM6 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
StrcQ8VIM6 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.13□□□□□ -0.15
StrcQ8VIM6 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC14.13□□□□□ -0.15
StrcQ8VIM6 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
StrcQ8VIM6 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
StrcQ8VIM6 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
StrcQ8VIM6 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
StrcQ8VIM6 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
StrcQ8VIM6 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
StrcQ8VIM6 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
StrcQ8VIM6 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
StrcQ8VIM6 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC14.13□□□□□ -0.15
StrcQ8VIM6 Gm12418-201ENSMUST00000118116 942 ntBASIC14.13□□□□□ -0.15
StrcQ8VIM6 Gm14034-201ENSMUST00000120147 551 ntBASIC14.13□□□□□ -0.15
StrcQ8VIM6 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC14.13□□□□□ -0.15
StrcQ8VIM6 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC14.13□□□□□ -0.15
StrcQ8VIM6 Ighv1-2-201ENSMUST00000195325 378 ntBASIC14.13□□□□□ -0.15
StrcQ8VIM6 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
StrcQ8VIM6 AC169511.1-201ENSMUST00000227639 995 ntBASIC14.13□□□□□ -0.15
StrcQ8VIM6 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
StrcQ8VIM6 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
StrcQ8VIM6 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
StrcQ8VIM6 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.13□□□□□ -0.15
StrcQ8VIM6 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
StrcQ8VIM6 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
StrcQ8VIM6 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
StrcQ8VIM6 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
StrcQ8VIM6 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
StrcQ8VIM6 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
StrcQ8VIM6 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
StrcQ8VIM6 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
StrcQ8VIM6 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
StrcQ8VIM6 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.12□□□□□ -0.15
StrcQ8VIM6 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.12□□□□□ -0.15
StrcQ8VIM6 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
StrcQ8VIM6 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
StrcQ8VIM6 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
StrcQ8VIM6 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
StrcQ8VIM6 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
StrcQ8VIM6 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
StrcQ8VIM6 Gm14071-201ENSMUST00000117817 509 ntBASIC14.12□□□□□ -0.15
StrcQ8VIM6 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC14.12□□□□□ -0.15
StrcQ8VIM6 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
StrcQ8VIM6 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC14.12□□□□□ -0.15
StrcQ8VIM6 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
StrcQ8VIM6 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC14.12□□□□□ -0.15
StrcQ8VIM6 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms