Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Gm8805-201ENSMUST00000117848 313 ntBASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Gm13813-201ENSMUST00000120998 787 ntBASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Gm5745-201ENSMUST00000183748 313 ntBASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh18Q8VHR0 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh18Q8VHR0 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Pcdh18Q8VHR0 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdh18Q8VHR0 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.81□□□□□ -0.52
Pcdh18Q8VHR0 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh18Q8VHR0 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Pcdh18Q8VHR0 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.81□□□□□ -0.52
Pcdh18Q8VHR0 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh18Q8VHR0 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh18Q8VHR0 Gm8213-201ENSMUST00000118191 441 ntBASIC11.81□□□□□ -0.52
Pcdh18Q8VHR0 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh18Q8VHR0 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.81□□□□□ -0.52
Pcdh18Q8VHR0 Gm9630-201ENSMUST00000178304 885 ntBASIC11.81□□□□□ -0.52
Pcdh18Q8VHR0 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh18Q8VHR0 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh18Q8VHR0 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.81□□□□□ -0.52
Pcdh18Q8VHR0 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh18Q8VHR0 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh18Q8VHR0 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Pcdh18Q8VHR0 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh18Q8VHR0 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Pcdh18Q8VHR0 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh18Q8VHR0 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh18Q8VHR0 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh18Q8VHR0 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Pcdh18Q8VHR0 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdh18Q8VHR0 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh18Q8VHR0 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh18Q8VHR0 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Pcdh18Q8VHR0 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh18Q8VHR0 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh18Q8VHR0 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh18Q8VHR0 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh18Q8VHR0 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh18Q8VHR0 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh18Q8VHR0 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh18Q8VHR0 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh18Q8VHR0 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh18Q8VHR0 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh18Q8VHR0 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.8□□□□□ -0.52
Pcdh18Q8VHR0 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh18Q8VHR0 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh18Q8VHR0 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.8□□□□□ -0.52
Pcdh18Q8VHR0 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh18Q8VHR0 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh18Q8VHR0 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh18Q8VHR0 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh18Q8VHR0 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh18Q8VHR0 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh18Q8VHR0 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh18Q8VHR0 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh18Q8VHR0 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh18Q8VHR0 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms