Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Sox30Q8CGW4 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox30Q8CGW4 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox30Q8CGW4 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Sox30Q8CGW4 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox30Q8CGW4 Gm13316-201ENSMUST00000140537 691 ntBASIC13.31□□□□□ -0.28
Sox30Q8CGW4 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
Sox30Q8CGW4 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.31□□□□□ -0.28
Sox30Q8CGW4 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Sox30Q8CGW4 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox30Q8CGW4 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.31□□□□□ -0.28
Sox30Q8CGW4 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox30Q8CGW4 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox30Q8CGW4 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox30Q8CGW4 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox30Q8CGW4 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Sox30Q8CGW4 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Sox30Q8CGW4 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Sox30Q8CGW4 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox30Q8CGW4 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox30Q8CGW4 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox30Q8CGW4 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.31□□□□□ -0.28
Sox30Q8CGW4 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox30Q8CGW4 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox30Q8CGW4 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox30Q8CGW4 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox30Q8CGW4 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Sox30Q8CGW4 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox30Q8CGW4 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox30Q8CGW4 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox30Q8CGW4 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Sox30Q8CGW4 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox30Q8CGW4 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.3□□□□□ -0.28
Sox30Q8CGW4 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Sox30Q8CGW4 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox30Q8CGW4 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC13.3□□□□□ -0.28
Sox30Q8CGW4 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Sox30Q8CGW4 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox30Q8CGW4 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.3□□□□□ -0.28
Sox30Q8CGW4 Gm28882-201ENSMUST00000185504 314 ntBASIC13.3□□□□□ -0.28
Sox30Q8CGW4 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox30Q8CGW4 Gm43002-201ENSMUST00000200310 155 ntBASIC13.3□□□□□ -0.28
Sox30Q8CGW4 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox30Q8CGW4 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox30Q8CGW4 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox30Q8CGW4 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox30Q8CGW4 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Sox30Q8CGW4 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox30Q8CGW4 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox30Q8CGW4 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox30Q8CGW4 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox30Q8CGW4 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.3□□□□□ -0.28
Sox30Q8CGW4 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox30Q8CGW4 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox30Q8CGW4 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Sox30Q8CGW4 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Sox30Q8CGW4 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Sox30Q8CGW4 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox30Q8CGW4 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox30Q8CGW4 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC13.29□□□□□ -0.28
Sox30Q8CGW4 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sox30Q8CGW4 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox30Q8CGW4 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox30Q8CGW4 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sox30Q8CGW4 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox30Q8CGW4 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Sox30Q8CGW4 Gm6560-201ENSMUST00000198588 1591 ntBASIC13.29□□□□□ -0.28
Sox30Q8CGW4 BC043934-202ENSMUST00000185694 2356 ntBASIC13.29□□□□□ -0.28
Sox30Q8CGW4 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox30Q8CGW4 Gm12164-201ENSMUST00000121695 551 ntBASIC13.29□□□□□ -0.28
Sox30Q8CGW4 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox30Q8CGW4 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.29□□□□□ -0.28
Sox30Q8CGW4 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC13.29□□□□□ -0.28
Sox30Q8CGW4 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.29□□□□□ -0.28
Sox30Q8CGW4 Gm38314-201ENSMUST00000195709 625 ntBASIC13.29□□□□□ -0.28
Sox30Q8CGW4 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Sox30Q8CGW4 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.29□□□□□ -0.28
Sox30Q8CGW4 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.29□□□□□ -0.28
Sox30Q8CGW4 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sox30Q8CGW4 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13.29□□□□□ -0.28
Sox30Q8CGW4 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox30Q8CGW4 Gm21136-201ENSMUST00000186812 2575 ntBASIC13.29□□□□□ -0.28
Sox30Q8CGW4 Gm6605-201ENSMUST00000031488 2574 ntBASIC13.29□□□□□ -0.28
Sox30Q8CGW4 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox30Q8CGW4 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox30Q8CGW4 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox30Q8CGW4 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Sox30Q8CGW4 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Sox30Q8CGW4 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox30Q8CGW4 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox30Q8CGW4 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox30Q8CGW4 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC13.29□□□□□ -0.28
Sox30Q8CGW4 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sox30Q8CGW4 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox30Q8CGW4 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Sox30Q8CGW4 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sox30Q8CGW4 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox30Q8CGW4 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC13.28□□□□□ -0.28
Sox30Q8CGW4 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox30Q8CGW4 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms