Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 Gm8566-201ENSMUST00000120174 465 ntBASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 AC140293.1-201ENSMUST00000225626 1247 ntBASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc17Q8CE13 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Gm11450-201ENSMUST00000121144 333 ntBASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Gm19353-201ENSMUST00000184561 445 ntBASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc17Q8CE13 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.72□□□□□ -0.37
Ccdc17Q8CE13 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc17Q8CE13 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Ccdc17Q8CE13 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ccdc17Q8CE13 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc17Q8CE13 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc17Q8CE13 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc17Q8CE13 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ccdc17Q8CE13 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc17Q8CE13 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc17Q8CE13 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc17Q8CE13 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms