Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm10312-201ENSMUST00000078515 489 ntBASIC13.46□□□□□ -0.25
Trim9Q8C7M3 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim9Q8C7M3 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim9Q8C7M3 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Trim9Q8C7M3 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim9Q8C7M3 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Trim9Q8C7M3 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim9Q8C7M3 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Trim9Q8C7M3 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trim9Q8C7M3 Cog3-203ENSMUST00000227473 4197 ntBASIC13.46□□□□□ -0.26
Trim9Q8C7M3 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim9Q8C7M3 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trim9Q8C7M3 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim9Q8C7M3 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim9Q8C7M3 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.45□□□□□ -0.26
Trim9Q8C7M3 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Trim9Q8C7M3 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim9Q8C7M3 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim9Q8C7M3 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim9Q8C7M3 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim9Q8C7M3 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim9Q8C7M3 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim9Q8C7M3 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Trim9Q8C7M3 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim9Q8C7M3 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim9Q8C7M3 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim9Q8C7M3 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trim9Q8C7M3 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim9Q8C7M3 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC13.45□□□□□ -0.26
Trim9Q8C7M3 Gm12036-201ENSMUST00000120008 530 ntBASIC13.45□□□□□ -0.26
Trim9Q8C7M3 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC13.45□□□□□ -0.26
Trim9Q8C7M3 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.45□□□□□ -0.26
Trim9Q8C7M3 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.45□□□□□ -0.26
Trim9Q8C7M3 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.45□□□□□ -0.26
Trim9Q8C7M3 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim9Q8C7M3 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim9Q8C7M3 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim9Q8C7M3 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.45□□□□□ -0.26
Trim9Q8C7M3 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim9Q8C7M3 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim9Q8C7M3 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trim9Q8C7M3 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.45□□□□□ -0.26
Trim9Q8C7M3 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Trim9Q8C7M3 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim9Q8C7M3 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim9Q8C7M3 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim9Q8C7M3 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Trim9Q8C7M3 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim9Q8C7M3 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim9Q8C7M3 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.45□□□□□ -0.26
Trim9Q8C7M3 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim9Q8C7M3 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim9Q8C7M3 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim9Q8C7M3 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim9Q8C7M3 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim9Q8C7M3 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim9Q8C7M3 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim9Q8C7M3 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim9Q8C7M3 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim9Q8C7M3 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim9Q8C7M3 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.44□□□□□ -0.26
Trim9Q8C7M3 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim9Q8C7M3 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim9Q8C7M3 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim9Q8C7M3 Gm11930-201ENSMUST00000117788 190 ntBASIC13.44□□□□□ -0.26
Trim9Q8C7M3 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.44□□□□□ -0.26
Trim9Q8C7M3 Gm12164-201ENSMUST00000121695 551 ntBASIC13.44□□□□□ -0.26
Trim9Q8C7M3 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim9Q8C7M3 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim9Q8C7M3 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC13.44□□□□□ -0.26
Trim9Q8C7M3 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim9Q8C7M3 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.44□□□□□ -0.26
Trim9Q8C7M3 Gm3096-201ENSMUST00000185770 364 ntBASIC13.44□□□□□ -0.26
Trim9Q8C7M3 Gm8885-201ENSMUST00000189382 598 ntBASIC13.44□□□□□ -0.26
Trim9Q8C7M3 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.44□□□□□ -0.26
Trim9Q8C7M3 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trim9Q8C7M3 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.44□□□□□ -0.26
Trim9Q8C7M3 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim9Q8C7M3 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim9Q8C7M3 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim9Q8C7M3 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim9Q8C7M3 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim9Q8C7M3 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.44□□□□□ -0.26
Trim9Q8C7M3 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.44□□□□□ -0.26
Trim9Q8C7M3 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trim9Q8C7M3 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim9Q8C7M3 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim9Q8C7M3 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim9Q8C7M3 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.44□□□□□ -0.26
Trim9Q8C7M3 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim9Q8C7M3 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim9Q8C7M3 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim9Q8C7M3 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim9Q8C7M3 Gm43727-201ENSMUST00000198021 2647 ntBASIC13.43□□□□□ -0.26
Trim9Q8C7M3 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim9Q8C7M3 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim9Q8C7M3 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Trim9Q8C7M3 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim9Q8C7M3 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim9Q8C7M3 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms