Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm14277-201ENSMUST00000121195 360 ntBASIC13.57□□□□□ -0.24
Trim47Q8C0E3 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim47Q8C0E3 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim47Q8C0E3 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim47Q8C0E3 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim47Q8C0E3 Gm5363-201ENSMUST00000211927 938 ntBASIC13.57□□□□□ -0.24
Trim47Q8C0E3 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC13.57□□□□□ -0.24
Trim47Q8C0E3 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim47Q8C0E3 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim47Q8C0E3 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trim47Q8C0E3 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim47Q8C0E3 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim47Q8C0E3 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Trim47Q8C0E3 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim47Q8C0E3 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim47Q8C0E3 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim47Q8C0E3 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.57□□□□□ -0.24
Trim47Q8C0E3 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trim47Q8C0E3 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.57□□□□□ -0.24
Trim47Q8C0E3 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trim47Q8C0E3 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim47Q8C0E3 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim47Q8C0E3 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim47Q8C0E3 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim47Q8C0E3 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim47Q8C0E3 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim47Q8C0E3 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim47Q8C0E3 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trim47Q8C0E3 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim47Q8C0E3 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Trim47Q8C0E3 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim47Q8C0E3 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim47Q8C0E3 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim47Q8C0E3 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim47Q8C0E3 Gm15626-201ENSMUST00000117478 868 ntBASIC13.56□□□□□ -0.24
Trim47Q8C0E3 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim47Q8C0E3 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
Trim47Q8C0E3 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim47Q8C0E3 Gm44124-201ENSMUST00000204159 472 ntBASIC13.56□□□□□ -0.24
Trim47Q8C0E3 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim47Q8C0E3 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC13.56□□□□□ -0.24
Trim47Q8C0E3 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.56□□□□□ -0.24
Trim47Q8C0E3 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.56□□□□□ -0.24
Trim47Q8C0E3 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim47Q8C0E3 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim47Q8C0E3 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim47Q8C0E3 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim47Q8C0E3 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Trim47Q8C0E3 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim47Q8C0E3 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trim47Q8C0E3 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim47Q8C0E3 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trim47Q8C0E3 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim47Q8C0E3 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim47Q8C0E3 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim47Q8C0E3 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim47Q8C0E3 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim47Q8C0E3 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim47Q8C0E3 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim47Q8C0E3 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim47Q8C0E3 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trim47Q8C0E3 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.56□□□□□ -0.24
Trim47Q8C0E3 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim47Q8C0E3 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim47Q8C0E3 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trim47Q8C0E3 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim47Q8C0E3 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim47Q8C0E3 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim47Q8C0E3 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim47Q8C0E3 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trim47Q8C0E3 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
Trim47Q8C0E3 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trim47Q8C0E3 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim47Q8C0E3 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim47Q8C0E3 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim47Q8C0E3 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim47Q8C0E3 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim47Q8C0E3 Gm23912-201ENSMUST00000104687 87 ntBASIC13.55□□□□□ -0.24
Trim47Q8C0E3 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim47Q8C0E3 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trim47Q8C0E3 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC13.55□□□□□ -0.24
Trim47Q8C0E3 Gm18711-201ENSMUST00000199341 750 ntBASIC13.55□□□□□ -0.24
Trim47Q8C0E3 AC125117.2-201ENSMUST00000228344 1140 ntBASIC13.55□□□□□ -0.24
Trim47Q8C0E3 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim47Q8C0E3 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim47Q8C0E3 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim47Q8C0E3 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.55□□□□□ -0.24
Trim47Q8C0E3 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.55□□□□□ -0.24
Trim47Q8C0E3 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim47Q8C0E3 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC13.55□□□□□ -0.24
Trim47Q8C0E3 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim47Q8C0E3 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.55□□□□□ -0.24
Trim47Q8C0E3 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC13.55□□□□□ -0.24
Trim47Q8C0E3 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trim47Q8C0E3 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Trim47Q8C0E3 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim47Q8C0E3 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim47Q8C0E3 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim47Q8C0E3 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim47Q8C0E3 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms