Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sfr1Q8BP27 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Sfr1Q8BP27 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Sfr1Q8BP27 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sfr1Q8BP27 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sfr1Q8BP27 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sfr1Q8BP27 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sfr1Q8BP27 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sfr1Q8BP27 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sfr1Q8BP27 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sfr1Q8BP27 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sfr1Q8BP27 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sfr1Q8BP27 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sfr1Q8BP27 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Sfr1Q8BP27 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sfr1Q8BP27 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Sfr1Q8BP27 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sfr1Q8BP27 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sfr1Q8BP27 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sfr1Q8BP27 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Sfr1Q8BP27 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sfr1Q8BP27 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Sfr1Q8BP27 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sfr1Q8BP27 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Sfr1Q8BP27 Gm15547-201ENSMUST00000122152 333 ntBASIC12.51□□□□□ -0.41
Sfr1Q8BP27 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sfr1Q8BP27 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Sfr1Q8BP27 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.51□□□□□ -0.41
Sfr1Q8BP27 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.51□□□□□ -0.41
Sfr1Q8BP27 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Sfr1Q8BP27 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sfr1Q8BP27 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sfr1Q8BP27 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sfr1Q8BP27 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sfr1Q8BP27 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sfr1Q8BP27 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sfr1Q8BP27 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sfr1Q8BP27 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sfr1Q8BP27 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sfr1Q8BP27 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Sfr1Q8BP27 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sfr1Q8BP27 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sfr1Q8BP27 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sfr1Q8BP27 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sfr1Q8BP27 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sfr1Q8BP27 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sfr1Q8BP27 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.5□□□□□ -0.41
Sfr1Q8BP27 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sfr1Q8BP27 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sfr1Q8BP27 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sfr1Q8BP27 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sfr1Q8BP27 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.5□□□□□ -0.41
Sfr1Q8BP27 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sfr1Q8BP27 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sfr1Q8BP27 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sfr1Q8BP27 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sfr1Q8BP27 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sfr1Q8BP27 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sfr1Q8BP27 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.5□□□□□ -0.41
Sfr1Q8BP27 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.5□□□□□ -0.41
Sfr1Q8BP27 Gm20482-202ENSMUST00000174729 825 ntBASIC12.5□□□□□ -0.41
Sfr1Q8BP27 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sfr1Q8BP27 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sfr1Q8BP27 Gm27320-201ENSMUST00000184892 109 ntBASIC12.5□□□□□ -0.41
Sfr1Q8BP27 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.5□□□□□ -0.41
Sfr1Q8BP27 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sfr1Q8BP27 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.5□□□□□ -0.41
Sfr1Q8BP27 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.5□□□□□ -0.41
Sfr1Q8BP27 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.5□□□□□ -0.41
Sfr1Q8BP27 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.5□□□□□ -0.41
Sfr1Q8BP27 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sfr1Q8BP27 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sfr1Q8BP27 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.5□□□□□ -0.41
Sfr1Q8BP27 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sfr1Q8BP27 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.5□□□□□ -0.41
Sfr1Q8BP27 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sfr1Q8BP27 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sfr1Q8BP27 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sfr1Q8BP27 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sfr1Q8BP27 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sfr1Q8BP27 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sfr1Q8BP27 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sfr1Q8BP27 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sfr1Q8BP27 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sfr1Q8BP27 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sfr1Q8BP27 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.5□□□□□ -0.41
Sfr1Q8BP27 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Sfr1Q8BP27 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sfr1Q8BP27 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Sfr1Q8BP27 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.49□□□□□ -0.41
Sfr1Q8BP27 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sfr1Q8BP27 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sfr1Q8BP27 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sfr1Q8BP27 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sfr1Q8BP27 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sfr1Q8BP27 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sfr1Q8BP27 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sfr1Q8BP27 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sfr1Q8BP27 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sfr1Q8BP27 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms