Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
Smg1Q8BKX6 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smg1Q8BKX6 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smg1Q8BKX6 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Smg1Q8BKX6 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Smg1Q8BKX6 Gm43547-201ENSMUST00000197729 328 ntBASIC10.05□□□□□ -0.8
Smg1Q8BKX6 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC10.05□□□□□ -0.8
Smg1Q8BKX6 Gm44506-201ENSMUST00000206278 965 ntBASIC10.05□□□□□ -0.8
Smg1Q8BKX6 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smg1Q8BKX6 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smg1Q8BKX6 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.05□□□□□ -0.8
Smg1Q8BKX6 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Smg1Q8BKX6 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC10.05□□□□□ -0.8
Smg1Q8BKX6 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Gm12179-201ENSMUST00000118344 1272 ntBASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Ighv1-70-201ENSMUST00000196509 351 ntBASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Gm13445-201ENSMUST00000121664 307 ntBASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Gm6331-201ENSMUST00000217890 450 ntBASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Gm5451-201ENSMUST00000080545 579 ntBASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Gm25554-201ENSMUST00000158075 113 ntBASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Gm4310-201ENSMUST00000177847 889 ntBASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Gm37452-201ENSMUST00000194416 1160 ntBASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Gm10263-201ENSMUST00000085163 300 ntBASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smg1Q8BKX6 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Smg1Q8BKX6 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smg1Q8BKX6 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smg1Q8BKX6 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smg1Q8BKX6 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.03□□□□□ -0.8
Smg1Q8BKX6 Gm9204-201ENSMUST00000212641 947 ntBASIC10.03□□□□□ -0.8
Smg1Q8BKX6 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smg1Q8BKX6 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smg1Q8BKX6 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smg1Q8BKX6 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smg1Q8BKX6 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smg1Q8BKX6 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC10.03□□□□□ -0.8
Smg1Q8BKX6 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC10.03□□□□□ -0.8
Smg1Q8BKX6 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC10.03□□□□□ -0.8
Smg1Q8BKX6 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.03□□□□□ -0.8
Smg1Q8BKX6 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
Smg1Q8BKX6 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smg1Q8BKX6 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smg1Q8BKX6 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smg1Q8BKX6 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC10.03□□□□□ -0.8
Smg1Q8BKX6 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.03□□□□□ -0.8
Smg1Q8BKX6 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smg1Q8BKX6 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smg1Q8BKX6 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smg1Q8BKX6 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smg1Q8BKX6 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smg1Q8BKX6 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC10.03□□□□□ -0.8
Smg1Q8BKX6 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smg1Q8BKX6 Gm15626-201ENSMUST00000117478 868 ntBASIC10.03□□□□□ -0.8
Smg1Q8BKX6 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC10.03□□□□□ -0.8
Smg1Q8BKX6 Gm5267-201ENSMUST00000191574 1045 ntBASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms