Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Gm12058-201ENSMUST00000118614 437 ntBASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Gm13736-201ENSMUST00000119272 253 ntBASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Mospd4-201ENSMUST00000180618 576 ntBASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn3Q8BHH8 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Clrn3Q8BHH8 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Clrn3Q8BHH8 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Clrn3Q8BHH8 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Clrn3Q8BHH8 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Clrn3Q8BHH8 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Clrn3Q8BHH8 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Clrn3Q8BHH8 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Clrn3Q8BHH8 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Clrn3Q8BHH8 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Clrn3Q8BHH8 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn3Q8BHH8 BC043934-202ENSMUST00000185694 2356 ntBASIC11.52□□□□□ -0.57
Clrn3Q8BHH8 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn3Q8BHH8 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn3Q8BHH8 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.52□□□□□ -0.57
Clrn3Q8BHH8 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn3Q8BHH8 Gm12314-201ENSMUST00000118104 538 ntBASIC11.52□□□□□ -0.57
Clrn3Q8BHH8 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn3Q8BHH8 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.52□□□□□ -0.57
Clrn3Q8BHH8 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn3Q8BHH8 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn3Q8BHH8 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.52□□□□□ -0.57
Clrn3Q8BHH8 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.52□□□□□ -0.57
Clrn3Q8BHH8 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn3Q8BHH8 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Clrn3Q8BHH8 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn3Q8BHH8 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Clrn3Q8BHH8 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn3Q8BHH8 Gm45880-201ENSMUST00000213041 853 ntBASIC11.52□□□□□ -0.57
Clrn3Q8BHH8 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.52□□□□□ -0.57
Clrn3Q8BHH8 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn3Q8BHH8 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn3Q8BHH8 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn3Q8BHH8 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn3Q8BHH8 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn3Q8BHH8 Gm24136-201ENSMUST00000083374 165 ntBASIC11.52□□□□□ -0.57
Clrn3Q8BHH8 Gm10478-201ENSMUST00000084451 396 ntBASIC11.52□□□□□ -0.57
Clrn3Q8BHH8 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn3Q8BHH8 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn3Q8BHH8 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn3Q8BHH8 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn3Q8BHH8 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms